RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 MT1GP13640 62 aa6.76□□□□□ -1.33
LINC01220-202ENST00000561000 RPS28P62857 69 aaKnown RBP6.73□□□□□ -1.33
LINC01220-202ENST00000561000 PP632Q6XCG6 107 aa6.71□□□□□ -1.34
LINC01220-202ENST00000561000 LCE1DQ5T752 114 aa6.68□□□□□ -1.34
LINC01220-202ENST00000561000 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
LINC01220-202ENST00000561000 MT1MQ8N339 61 aa6.65□□□□□ -1.34
LINC01220-202ENST00000561000 A6NED7 52 aa6.62□□□□□ -1.35
LINC01220-202ENST00000561000 TNP1P09430 55 aa6.62□□□□□ -1.35
LINC01220-202ENST00000561000 MT1LQ93083 61 aa6.62□□□□□ -1.35
LINC01220-202ENST00000561000 MT4P47944 62 aa6.61□□□□□ -1.35
LINC01220-202ENST00000561000 LCE4AQ5TA78 99 aa6.61□□□□□ -1.35
LINC01220-202ENST00000561000 KRTAP4-3Q9BYR4 195 aa6.53□□□□□ -1.36
LINC01220-202ENST00000561000 HMCN1Q96RW7 5635 aa6.51□□□□□ -1.37
LINC01220-202ENST00000561000 K7ERS5 55 aa6.47□□□□□ -1.37
LINC01220-202ENST00000561000 KRTAP5-4Q6L8H1 288 aa6.42□□□□□ -1.38
LINC01220-202ENST00000561000 KRTAP25-1Q3LHN0 102 aa6.39□□□□□ -1.39
LINC01220-202ENST00000561000 KRTAP4-6Q9BYQ5 205 aa6.39□□□□□ -1.39
LINC01220-202ENST00000561000 CDC42SE1Q9NRR8 79 aa6.38□□□□□ -1.39
LINC01220-202ENST00000561000 AHNAK2Q8IVF2 5795 aa6.36□□□□□ -1.39
LINC01220-202ENST00000561000 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
LINC01220-202ENST00000561000 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
LINC01220-202ENST00000561000 KRTAP5-10Q6L8G5 202 aa6.28□□□□□ -1.4
LINC01220-202ENST00000561000 ROMO1P60602 79 aa6.23□□□□□ -1.41
LINC01220-202ENST00000561000 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
LINC01220-202ENST00000561000 KRTAP5-3Q6L8H2 238 aa6.11□□□□□ -1.43
LINC01220-202ENST00000561000 KRTAP20-2Q3LI61 65 aa6.1□□□□□ -1.43
LINC01220-202ENST00000561000 KRTAP5-5Q701N2 237 aaPredicted RBP6.08□□□□□ -1.44
LINC01220-202ENST00000561000 KRTAP5-7Q6L8G8 165 aa6.07□□□□□ -1.44
LINC01220-202ENST00000561000 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
LINC01220-202ENST00000561000 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
LINC01220-202ENST00000561000 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
LINC01220-202ENST00000561000 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
LINC01220-202ENST00000561000 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
LINC01220-202ENST00000561000 SYNE1Q8NF91 8797 aaKnown RBP5.91□□□□□ -1.46
LINC01220-202ENST00000561000 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
LINC01220-202ENST00000561000 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
LINC01220-202ENST00000561000 KRTAP9-6A8MVA2 160 aa5.67□□□□□ -1.5
LINC01220-202ENST00000561000 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
LINC01220-202ENST00000561000 KRTAP4-11Q9BYQ6 195 aa5.63□□□□□ -1.51
LINC01220-202ENST00000561000 MT1AP04731 61 aa5.62□□□□□ -1.51
LINC01220-202ENST00000561000 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
LINC01220-202ENST00000561000 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
LINC01220-202ENST00000561000 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
LINC01220-202ENST00000561000 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
LINC01220-202ENST00000561000 KRTAP5-8O75690 187 aa5.43□□□□□ -1.54
LINC01220-202ENST00000561000 PRO0628Q9UI54 55 aa5.43□□□□□ -1.54
LINC01220-202ENST00000561000 KRTAP6-2Q3LI66 62 aa5.42□□□□□ -1.54
LINC01220-202ENST00000561000 OBSCNQ5VST9 7968 aa5.31□□□□□ -1.56
LINC01220-202ENST00000561000 AHNAKQ09666 5890 aaKnown RBP5.29□□□□□ -1.56
LINC01220-202ENST00000561000 MUC5ACP98088 5654 aa5.26□□□□□ -1.57
LINC01220-202ENST00000561000 MUC5BQ9HC84 5762 aaPredicted RBP5.25□□□□□ -1.57
LINC01220-202ENST00000561000 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
LINC01220-202ENST00000561000 MT3P25713 68 aa5.18□□□□□ -1.58
LINC01220-202ENST00000561000 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.59
LINC01220-202ENST00000561000 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
LINC01220-202ENST00000561000 SVIPQ8NHG7 77 aa4.92□□□□□ -1.62
LINC01220-202ENST00000561000 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
LINC01220-202ENST00000561000 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
LINC01220-202ENST00000561000 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
LINC01220-202ENST00000561000 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
LINC01220-202ENST00000561000 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
LINC01220-202ENST00000561000 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
LINC01220-202ENST00000561000 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
LINC01220-202ENST00000561000 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
LINC01220-202ENST00000561000 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
LINC01220-202ENST00000561000 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
LINC01220-202ENST00000561000 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
LINC01220-202ENST00000561000 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
LINC01220-202ENST00000561000 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
LINC01220-202ENST00000561000 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
LINC01220-202ENST00000561000 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
LINC01220-202ENST00000561000 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
LINC01220-202ENST00000561000 PRM1P04553 51 aa3.26□□□□□ -1.89
LINC01220-202ENST00000561000 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
LINC01220-202ENST00000561000 INE1O15225 51 aa3.03□□□□□ -1.92
LINC01220-202ENST00000561000 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
LINC01220-202ENST00000561000 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
LINC01220-202ENST00000561000 H3BS24 57 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 69.6 ms