RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 LUZP6Q538Z0 58 aa6.36□□□□□ -1.39
RPL28-211ENST00000560881 LCE1AQ5T7P2 110 aa6.32□□□□□ -1.4
RPL28-211ENST00000560881 A0A0A0MQY5 61 aa6.26□□□□□ -1.41
RPL28-211ENST00000560881 TNP1P09430 55 aa6.26□□□□□ -1.41
RPL28-211ENST00000560881 KRTAP19-7Q3SYF9 63 aa6.26□□□□□ -1.41
RPL28-211ENST00000560881 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
RPL28-211ENST00000560881 KRTAP20-1Q3LI63 56 aa6.24□□□□□ -1.41
RPL28-211ENST00000560881 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
RPL28-211ENST00000560881 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
RPL28-211ENST00000560881 MT1EP04732 61 aa6.18□□□□□ -1.42
RPL28-211ENST00000560881 SPRR2DP22532 72 aa6.14□□□□□ -1.43
RPL28-211ENST00000560881 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
RPL28-211ENST00000560881 KRTAP2-3P0C7H8 128 aa6.1□□□□□ -1.43
RPL28-211ENST00000560881 KRTAP2-4Q9BYR9 128 aa6.1□□□□□ -1.43
RPL28-211ENST00000560881 KRTAP19-3Q7Z4W3 81 aa6.05□□□□□ -1.44
RPL28-211ENST00000560881 LCE5AQ5TCM9 118 aa6.03□□□□□ -1.44
RPL28-211ENST00000560881 MT1LQ93083 61 aa5.96□□□□□ -1.46
RPL28-211ENST00000560881 DSTQ03001 7570 aaKnown RBP5.95□□□□□ -1.46
RPL28-211ENST00000560881 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
RPL28-211ENST00000560881 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
RPL28-211ENST00000560881 MT1GP13640 62 aa5.91□□□□□ -1.46
RPL28-211ENST00000560881 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.47
RPL28-211ENST00000560881 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.47
RPL28-211ENST00000560881 MT1MQ8N339 61 aa5.86□□□□□ -1.47
RPL28-211ENST00000560881 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
RPL28-211ENST00000560881 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
RPL28-211ENST00000560881 INE1O15225 51 aa5.69□□□□□ -1.5
RPL28-211ENST00000560881 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
RPL28-211ENST00000560881 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
RPL28-211ENST00000560881 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
RPL28-211ENST00000560881 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
RPL28-211ENST00000560881 LCE4AQ5TA78 99 aa5.4□□□□□ -1.55
RPL28-211ENST00000560881 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
RPL28-211ENST00000560881 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
RPL28-211ENST00000560881 MT4P47944 62 aa5.38□□□□□ -1.55
RPL28-211ENST00000560881 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
RPL28-211ENST00000560881 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
RPL28-211ENST00000560881 KRTAP4-6Q9BYQ5 205 aa5.27□□□□□ -1.57
RPL28-211ENST00000560881 KRTAP9-6A8MVA2 160 aa5.23□□□□□ -1.57
RPL28-211ENST00000560881 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.58
RPL28-211ENST00000560881 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
RPL28-211ENST00000560881 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
RPL28-211ENST00000560881 KRTAP20-2Q3LI61 65 aa5.08□□□□□ -1.6
RPL28-211ENST00000560881 MT1AP04731 61 aa5.05□□□□□ -1.6
RPL28-211ENST00000560881 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
RPL28-211ENST00000560881 AHNAK2Q8IVF2 5795 aa4.99□□□□□ -1.61
RPL28-211ENST00000560881 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
RPL28-211ENST00000560881 KRTAP5-10Q6L8G5 202 aa4.89□□□□□ -1.63
RPL28-211ENST00000560881 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
RPL28-211ENST00000560881 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
RPL28-211ENST00000560881 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
RPL28-211ENST00000560881 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
RPL28-211ENST00000560881 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
RPL28-211ENST00000560881 MT3P25713 68 aa4.58□□□□□ -1.68
RPL28-211ENST00000560881 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
RPL28-211ENST00000560881 KRTAP5-8O75690 187 aa4.41□□□□□ -1.7
RPL28-211ENST00000560881 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
RPL28-211ENST00000560881 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
RPL28-211ENST00000560881 MUC5BQ9HC84 5762 aaPredicted RBP4.13□□□□□ -1.75
RPL28-211ENST00000560881 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
RPL28-211ENST00000560881 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.76
RPL28-211ENST00000560881 AHNAKQ09666 5890 aaKnown RBP4.07□□□□□ -1.76
RPL28-211ENST00000560881 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
RPL28-211ENST00000560881 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
RPL28-211ENST00000560881 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
RPL28-211ENST00000560881 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
RPL28-211ENST00000560881 PRM1P04553 51 aa3.9□□□□□ -1.78
RPL28-211ENST00000560881 LCE1CQ5T751 118 aa3.84□□□□□ -1.8
RPL28-211ENST00000560881 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
RPL28-211ENST00000560881 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
RPL28-211ENST00000560881 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
RPL28-211ENST00000560881 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
RPL28-211ENST00000560881 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
RPL28-211ENST00000560881 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
RPL28-211ENST00000560881 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
RPL28-211ENST00000560881 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
RPL28-211ENST00000560881 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
RPL28-211ENST00000560881 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 105.1 ms