RNA–Protein interactions for RNA: ENST00000560816.5

ETFA-217, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-217ENST00000560816 TNP1P09430 55 aa3.02□□□□□ -1.93
ETFA-217ENST00000560816 ROMO1P60602 79 aa3.02□□□□□ -1.93
ETFA-217ENST00000560816 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
ETFA-217ENST00000560816 KRTAP25-1Q3LHN0 102 aa2.99□□□□□ -1.93
ETFA-217ENST00000560816 MACF1Q9UPN3 7388 aaKnown RBP2.98□□□□□ -1.93
ETFA-217ENST00000560816 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
ETFA-217ENST00000560816 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
ETFA-217ENST00000560816 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
ETFA-217ENST00000560816 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
ETFA-217ENST00000560816 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
ETFA-217ENST00000560816 KMT2DO14686 5537 aa2.9□□□□□ -1.95
ETFA-217ENST00000560816 MT3P25713 68 aa2.9□□□□□ -1.95
ETFA-217ENST00000560816 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
ETFA-217ENST00000560816 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
ETFA-217ENST00000560816 SPRR2FQ96RM1 72 aa2.86□□□□□ -1.95
ETFA-217ENST00000560816 KRTAP19-5Q3LI72 72 aa2.85□□□□□ -1.95
ETFA-217ENST00000560816 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
ETFA-217ENST00000560816 PP632Q6XCG6 107 aa2.85□□□□□ -1.95
ETFA-217ENST00000560816 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
ETFA-217ENST00000560816 MT1EP04732 61 aa2.81□□□□□ -1.96
ETFA-217ENST00000560816 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
ETFA-217ENST00000560816 NEBP20929 6669 aa2.77□□□□□ -1.97
ETFA-217ENST00000560816 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
ETFA-217ENST00000560816 SPRR2EP22531 72 aa2.76□□□□□ -1.97
ETFA-217ENST00000560816 SPRR2BP35325 72 aa2.76□□□□□ -1.97
ETFA-217ENST00000560816 SPRR2AP35326 72 aa2.76□□□□□ -1.97
ETFA-217ENST00000560816 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
ETFA-217ENST00000560816 KRTAP19-3Q7Z4W3 81 aa2.73□□□□□ -1.97
ETFA-217ENST00000560816 MT1LQ93083 61 aa2.73□□□□□ -1.97
ETFA-217ENST00000560816 MT1GP13640 62 aa2.69□□□□□ -1.98
ETFA-217ENST00000560816 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
ETFA-217ENST00000560816 SPRR2DP22532 72 aa2.67□□□□□ -1.98
ETFA-217ENST00000560816 MT1MQ8N339 61 aa2.66□□□□□ -1.98
ETFA-217ENST00000560816 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
ETFA-217ENST00000560816 KRTAP20-1Q3LI63 56 aa2.59□□□□□ -1.99
ETFA-217ENST00000560816 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
ETFA-217ENST00000560816 GPR98Q8WXG9 6306 aa2.59□□□□□ -2
ETFA-217ENST00000560816 KRTAP2-3P0C7H8 128 aa2.57□□□□□ -2
ETFA-217ENST00000560816 KRTAP2-4Q9BYR9 128 aa2.57□□□□□ -2
ETFA-217ENST00000560816 KRTAP2-1Q9BYU5 128 aa2.5□□□□□ -2.01
ETFA-217ENST00000560816 DSTQ03001 7570 aaKnown RBP2.48□□□□□ -2.01
ETFA-217ENST00000560816 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
ETFA-217ENST00000560816 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
ETFA-217ENST00000560816 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
ETFA-217ENST00000560816 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
ETFA-217ENST00000560816 INE1O15225 51 aa2.38□□□□□ -2.03
ETFA-217ENST00000560816 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
ETFA-217ENST00000560816 MT1AP04731 61 aa2.34□□□□□ -2.03
ETFA-217ENST00000560816 MT4P47944 62 aa2.31□□□□□ -2.04
ETFA-217ENST00000560816 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
ETFA-217ENST00000560816 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
ETFA-217ENST00000560816 KRTAP12-4P60329 112 aa2.28□□□□□ -2.04
ETFA-217ENST00000560816 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
ETFA-217ENST00000560816 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
ETFA-217ENST00000560816 SYNE1Q8NF91 8797 aaKnown RBP2.26□□□□□ -2.05
ETFA-217ENST00000560816 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
ETFA-217ENST00000560816 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
ETFA-217ENST00000560816 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
ETFA-217ENST00000560816 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
ETFA-217ENST00000560816 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
ETFA-217ENST00000560816 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
ETFA-217ENST00000560816 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
ETFA-217ENST00000560816 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
ETFA-217ENST00000560816 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
ETFA-217ENST00000560816 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
ETFA-217ENST00000560816 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
ETFA-217ENST00000560816 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
ETFA-217ENST00000560816 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
ETFA-217ENST00000560816 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
ETFA-217ENST00000560816 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
ETFA-217ENST00000560816 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
ETFA-217ENST00000560816 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
ETFA-217ENST00000560816 PRM1P04553 51 aa1.56□□□□□ -2.16
ETFA-217ENST00000560816 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
ETFA-217ENST00000560816 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
ETFA-217ENST00000560816 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
ETFA-217ENST00000560816 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
ETFA-217ENST00000560816 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 10.3 ms