RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631		V9GYY9	64 aa		3.15	□□□□□ -1.91
RNF31-222	ENST00000560631		Q1T7F1	81 aa		3.14	□□□□□ -1.91
RNF31-222	ENST00000560631	MUC12	Q9UKN1	5478 aa		3.13	□□□□□ -1.91
RNF31-222	ENST00000560631	SPRR2F	Q96RM1	72 aa		3.13	□□□□□ -1.91
RNF31-222	ENST00000560631	PCP4	P48539	62 aa		3.12	□□□□□ -1.91
RNF31-222	ENST00000560631	RPS28	P62857	69 aa	Known RBP	3.1	□□□□□ -1.91
RNF31-222	ENST00000560631	KRTAP9-6	A8MVA2	160 aa		3.09	□□□□□ -1.91
RNF31-222	ENST00000560631	MIR22HG	Q0VDD5	57 aa		3.07	□□□□□ -1.92
RNF31-222	ENST00000560631	SPRR2E	P22531	72 aa		3.06	□□□□□ -1.92
RNF31-222	ENST00000560631	SPRR2B	P35325	72 aa		3.06	□□□□□ -1.92
RNF31-222	ENST00000560631	SPRR2A	P35326	72 aa		3.06	□□□□□ -1.92
RNF31-222	ENST00000560631	MDN1	Q9NU22	5596 aa		3.05	□□□□□ -1.92
RNF31-222	ENST00000560631	PSPHP1	O15172	72 aa		3.05	□□□□□ -1.92
RNF31-222	ENST00000560631	C10orf95	Q9H7T3	257 aa		3.05	□□□□□ -1.92
RNF31-222	ENST00000560631	TNP1	P09430	55 aa		3.03	□□□□□ -1.92
RNF31-222	ENST00000560631	KRTAP19-7	Q3SYF9	63 aa		3.02	□□□□□ -1.93
RNF31-222	ENST00000560631	OBSCN	Q5VST9	7968 aa		2.99	□□□□□ -1.93
RNF31-222	ENST00000560631		K7ERS5	55 aa		2.99	□□□□□ -1.93
RNF31-222	ENST00000560631	KRTAP2-3	P0C7H8	128 aa		2.99	□□□□□ -1.93
RNF31-222	ENST00000560631	KRTAP2-4	Q9BYR9	128 aa		2.99	□□□□□ -1.93
RNF31-222	ENST00000560631	MT1E	P04732	61 aa		2.98	□□□□□ -1.93
RNF31-222	ENST00000560631		A6NED7	52 aa		2.96	□□□□□ -1.94
RNF31-222	ENST00000560631	SPRR2D	P22532	72 aa		2.95	□□□□□ -1.94
RNF31-222	ENST00000560631	KRTAP19-5	Q3LI72	72 aa		2.95	□□□□□ -1.94
RNF31-222	ENST00000560631	LCE3A	Q5TA76	89 aa		2.95	□□□□□ -1.94
RNF31-222	ENST00000560631	LCE1F	Q5T754	118 aa		2.94	□□□□□ -1.94
RNF31-222	ENST00000560631	KRTAP19-3	Q7Z4W3	81 aa		2.94	□□□□□ -1.94
RNF31-222	ENST00000560631	KRTAP25-1	Q3LHN0	102 aa		2.93	□□□□□ -1.94
RNF31-222	ENST00000560631	KRTAP4-3	Q9BYR4	195 aa		2.91	□□□□□ -1.94
RNF31-222	ENST00000560631	KRTAP2-1	Q9BYU5	128 aa		2.91	□□□□□ -1.94
RNF31-222	ENST00000560631	MT1G	P13640	62 aa		2.9	□□□□□ -1.95
RNF31-222	ENST00000560631	CDC42SE1	Q9NRR8	79 aa		2.9	□□□□□ -1.95
RNF31-222	ENST00000560631	GPR98	Q8WXG9	6306 aa		2.89	□□□□□ -1.95
RNF31-222	ENST00000560631	MT1L	Q93083	61 aa		2.87	□□□□□ -1.95
RNF31-222	ENST00000560631	KRTAP12-3	P60328	96 aa		2.85	□□□□□ -1.95
RNF31-222	ENST00000560631	PP632	Q6XCG6	107 aa		2.85	□□□□□ -1.95
RNF31-222	ENST00000560631	MT1M	Q8N339	61 aa		2.82	□□□□□ -1.96
RNF31-222	ENST00000560631	ROMO1	P60602	79 aa		2.81	□□□□□ -1.96
RNF31-222	ENST00000560631	LCE3C	Q5T5A8	94 aa		2.78	□□□□□ -1.96
RNF31-222	ENST00000560631	KRTAP5-2	Q701N4	177 aa		2.78	□□□□□ -1.96
RNF31-222	ENST00000560631	DST	Q03001	7570 aa	Known RBP	2.71	□□□□□ -1.98
RNF31-222	ENST00000560631	BRK1	Q8WUW1	75 aa		2.66	□□□□□ -1.98
RNF31-222	ENST00000560631	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.6	□□□□□ -1.99
RNF31-222	ENST00000560631	MT4	P47944	62 aa		2.55	□□□□□ -2
RNF31-222	ENST00000560631	PMAIP1	Q13794	54 aa		2.53	□□□□□ -2
RNF31-222	ENST00000560631	LCE3E	Q5T5B0	92 aa		2.53	□□□□□ -2
RNF31-222	ENST00000560631	KRTAP5-10	Q6L8G5	202 aa		2.52	□□□□□ -2.01
RNF31-222	ENST00000560631	AHNAK2	Q8IVF2	5795 aa		2.51	□□□□□ -2.01
RNF31-222	ENST00000560631	HMCN1	Q96RW7	5635 aa		2.5	□□□□□ -2.01
RNF31-222	ENST00000560631	SPRR5	A0A1B0GTR4	108 aa		2.5	□□□□□ -2.01
RNF31-222	ENST00000560631	KRTAP12-4	P60329	112 aa		2.49	□□□□□ -2.01
RNF31-222	ENST00000560631		A0A0A0MQY5	61 aa		2.48	□□□□□ -2.01
RNF31-222	ENST00000560631	KRTAP20-2	Q3LI61	65 aa		2.47	□□□□□ -2.01
RNF31-222	ENST00000560631	KRTAP5-7	Q6L8G8	165 aa		2.47	□□□□□ -2.01
RNF31-222	ENST00000560631	PRO0628	Q9UI54	55 aa		2.47	□□□□□ -2.01
RNF31-222	ENST00000560631	MT1A	P04731	61 aa		2.46	□□□□□ -2.02
RNF31-222	ENST00000560631	KRTAP6-1	Q3LI64	71 aa		2.42	□□□□□ -2.02
RNF31-222	ENST00000560631	PRAC1	Q96KF2	57 aa		2.39	□□□□□ -2.03
RNF31-222	ENST00000560631	KRTAP5-8	O75690	187 aa		2.37	□□□□□ -2.03
RNF31-222	ENST00000560631	SYNE1	Q8NF91	8797 aa	Known RBP	2.37	□□□□□ -2.03
RNF31-222	ENST00000560631	LCE1C	Q5T751	118 aa		2.33	□□□□□ -2.04
RNF31-222	ENST00000560631	LCE1B	Q5T7P3	118 aa		2.33	□□□□□ -2.04
RNF31-222	ENST00000560631	KTN1-AS1	Q86SY8	53 aa		2.32	□□□□□ -2.04
RNF31-222	ENST00000560631	KRTAP6-2	Q3LI66	62 aa		2.27	□□□□□ -2.05
RNF31-222	ENST00000560631	NDUFAF8	A1L188	74 aa		2.22	□□□□□ -2.05
RNF31-222	ENST00000560631	AHNAK	Q09666	5890 aa	Known RBP	2.19	□□□□□ -2.06
RNF31-222	ENST00000560631	SVIP	Q8NHG7	77 aa		2.15	□□□□□ -2.07
RNF31-222	ENST00000560631	MUC5AC	P98088	5654 aa		2.15	□□□□□ -2.07
RNF31-222	ENST00000560631	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.11	□□□□□ -2.07
RNF31-222	ENST00000560631	LUZP6	Q538Z0	58 aa		2.02	□□□□□ -2.09
RNF31-222	ENST00000560631	MUC19	Q7Z5P9	8384 aa		2	□□□□□ -2.09
RNF31-222	ENST00000560631	LCE3D	Q9BYE3	92 aa		1.93	□□□□□ -2.1
RNF31-222	ENST00000560631	KRTAP21-2	Q3LI59	83 aa		1.68	□□□□□ -2.14
RNF31-222	ENST00000560631	PHGR1	C9JFL3	82 aa		1.48	□□□□□ -2.17
RNF31-222	ENST00000560631	INE1	O15225	51 aa		1.44	□□□□□ -2.18
RNF31-222	ENST00000560631	PRM1	P04553	51 aa		1.43	□□□□□ -2.18
RNF31-222	ENST00000560631	KRTAP21-1	Q3LI58	79 aa		1.11	□□□□□ -2.23
RNF31-222	ENST00000560631	MUC16	Q8WXI7	14507 aa		0.99	□□□□□ -2.25

Retrieved 78 of 20,778 RNA–protein pairs in 109.8 ms