RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 MDN1Q9NU22 5596 aa4.11□□□□□ -1.75
SNRPCP18-201ENST00000560619 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
SNRPCP18-201ENST00000560619 KRTAP20-1Q3LI63 56 aa4.1□□□□□ -1.75
SNRPCP18-201ENST00000560619 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
SNRPCP18-201ENST00000560619 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
SNRPCP18-201ENST00000560619 SPRR2DP22532 72 aa4.07□□□□□ -1.76
SNRPCP18-201ENST00000560619 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
SNRPCP18-201ENST00000560619 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
SNRPCP18-201ENST00000560619 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
SNRPCP18-201ENST00000560619 MT1GP13640 62 aa4.03□□□□□ -1.76
SNRPCP18-201ENST00000560619 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
SNRPCP18-201ENST00000560619 MT1LQ93083 61 aa3.98□□□□□ -1.77
SNRPCP18-201ENST00000560619 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
SNRPCP18-201ENST00000560619 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
SNRPCP18-201ENST00000560619 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
SNRPCP18-201ENST00000560619 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
SNRPCP18-201ENST00000560619 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
SNRPCP18-201ENST00000560619 MT1MQ8N339 61 aa3.9□□□□□ -1.79
SNRPCP18-201ENST00000560619 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
SNRPCP18-201ENST00000560619 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
SNRPCP18-201ENST00000560619 KRTAP4-7Q9BYR0 210 aa3.73□□□□□ -1.81
SNRPCP18-201ENST00000560619 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
SNRPCP18-201ENST00000560619 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
SNRPCP18-201ENST00000560619 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
SNRPCP18-201ENST00000560619 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
SNRPCP18-201ENST00000560619 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
SNRPCP18-201ENST00000560619 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
SNRPCP18-201ENST00000560619 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
SNRPCP18-201ENST00000560619 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
SNRPCP18-201ENST00000560619 LOC100996750A0A140TA64 210 aa3.51□□□□□ -1.85
SNRPCP18-201ENST00000560619 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
SNRPCP18-201ENST00000560619 MT4P47944 62 aa3.49□□□□□ -1.85
SNRPCP18-201ENST00000560619 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
SNRPCP18-201ENST00000560619 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
SNRPCP18-201ENST00000560619 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
SNRPCP18-201ENST00000560619 MT1AP04731 61 aa3.41□□□□□ -1.86
SNRPCP18-201ENST00000560619 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
SNRPCP18-201ENST00000560619 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
SNRPCP18-201ENST00000560619 SYNE1Q8NF91 8797 aaKnown RBP3.35□□□□□ -1.87
SNRPCP18-201ENST00000560619 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
SNRPCP18-201ENST00000560619 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
SNRPCP18-201ENST00000560619 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
SNRPCP18-201ENST00000560619 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
SNRPCP18-201ENST00000560619 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
SNRPCP18-201ENST00000560619 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
SNRPCP18-201ENST00000560619 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
SNRPCP18-201ENST00000560619 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
SNRPCP18-201ENST00000560619 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
SNRPCP18-201ENST00000560619 MT3P25713 68 aa3.13□□□□□ -1.91
SNRPCP18-201ENST00000560619 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
SNRPCP18-201ENST00000560619 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
SNRPCP18-201ENST00000560619 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
SNRPCP18-201ENST00000560619 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
SNRPCP18-201ENST00000560619 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.95
SNRPCP18-201ENST00000560619 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
SNRPCP18-201ENST00000560619 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
SNRPCP18-201ENST00000560619 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
SNRPCP18-201ENST00000560619 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
SNRPCP18-201ENST00000560619 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
SNRPCP18-201ENST00000560619 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
SNRPCP18-201ENST00000560619 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
SNRPCP18-201ENST00000560619 INE1O15225 51 aa2.69□□□□□ -1.98
SNRPCP18-201ENST00000560619 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
SNRPCP18-201ENST00000560619 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
SNRPCP18-201ENST00000560619 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
SNRPCP18-201ENST00000560619 H3BS24 57 aa2.58□□□□□ -2
SNRPCP18-201ENST00000560619 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
SNRPCP18-201ENST00000560619 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
SNRPCP18-201ENST00000560619 PRM1P04553 51 aa2.31□□□□□ -2.04
SNRPCP18-201ENST00000560619 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
SNRPCP18-201ENST00000560619 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
SNRPCP18-201ENST00000560619 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.06
SNRPCP18-201ENST00000560619 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
SNRPCP18-201ENST00000560619 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
SNRPCP18-201ENST00000560619 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
SNRPCP18-201ENST00000560619 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
SNRPCP18-201ENST00000560619 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 36.1 ms