RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-208ENST00000560444 MT1LQ93083 61 aa8.43□□□□□ -1.06
PIF1-208ENST00000560444 SPRR2FQ96RM1 72 aa8.34□□□□□ -1.07
PIF1-208ENST00000560444 KRTAP5-9P26371 169 aa8.26□□□□□ -1.09
PIF1-208ENST00000560444 KRTAP6-3Q3LI67 103 aa8.25□□□□□ -1.09
PIF1-208ENST00000560444 KRTAP19-3Q7Z4W3 81 aa8.19□□□□□ -1.1
PIF1-208ENST00000560444 MUC12Q9UKN1 5478 aa8.19□□□□□ -1.1
PIF1-208ENST00000560444 MT1GP13640 62 aa8.17□□□□□ -1.1
PIF1-208ENST00000560444 KRTAP4-7Q9BYR0 210 aa8.15□□□□□ -1.1
PIF1-208ENST00000560444 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
PIF1-208ENST00000560444 MT1MQ8N339 61 aa8.04□□□□□ -1.12
PIF1-208ENST00000560444 LCE5AQ5TCM9 118 aa8.02□□□□□ -1.13
PIF1-208ENST00000560444 MDN1Q9NU22 5596 aa8.01□□□□□ -1.13
PIF1-208ENST00000560444 KRTAP9-6A8MVA2 160 aa8□□□□□ -1.13
PIF1-208ENST00000560444 LCE1AQ5T7P2 110 aa7.98□□□□□ -1.13
PIF1-208ENST00000560444 SPRR2EP22531 72 aa7.97□□□□□ -1.13
PIF1-208ENST00000560444 SPRR2BP35325 72 aa7.97□□□□□ -1.13
PIF1-208ENST00000560444 SPRR2AP35326 72 aa7.97□□□□□ -1.13
PIF1-208ENST00000560444 H3BS24 57 aa7.9□□□□□ -1.14
PIF1-208ENST00000560444 KRTAP4-3Q9BYR4 195 aa7.85□□□□□ -1.15
PIF1-208ENST00000560444 NEBP20929 6669 aa7.78□□□□□ -1.16
PIF1-208ENST00000560444 SPRR2DP22532 72 aa7.68□□□□□ -1.18
PIF1-208ENST00000560444 LOC100996750A0A140TA64 210 aa7.64□□□□□ -1.19
PIF1-208ENST00000560444 A0A0A0MQY5 61 aa7.63□□□□□ -1.19
PIF1-208ENST00000560444 DSTQ03001 7570 aaKnown RBP7.57□□□□□ -1.2
PIF1-208ENST00000560444 KRTAP2-3P0C7H8 128 aa7.55□□□□□ -1.2
PIF1-208ENST00000560444 KRTAP2-4Q9BYR9 128 aa7.55□□□□□ -1.2
PIF1-208ENST00000560444 KRTAP2-1Q9BYU5 128 aa7.55□□□□□ -1.2
PIF1-208ENST00000560444 LCE3BQ5TA77 95 aa7.4□□□□□ -1.22
PIF1-208ENST00000560444 KRTAP5-5Q701N2 237 aaPredicted RBP7.23□□□□□ -1.25
PIF1-208ENST00000560444 KRTAP20-1Q3LI63 56 aa7.21□□□□□ -1.26
PIF1-208ENST00000560444 MT1AP04731 61 aa7.17□□□□□ -1.26
PIF1-208ENST00000560444 INE1O15225 51 aa7.13□□□□□ -1.27
PIF1-208ENST00000560444 KRTAP2-2Q9BYT5 123 aa7.09□□□□□ -1.27
PIF1-208ENST00000560444 KRTAP6-1Q3LI64 71 aa7.08□□□□□ -1.28
PIF1-208ENST00000560444 KRTAP5-4Q6L8H1 288 aa6.86□□□□□ -1.31
PIF1-208ENST00000560444 KRTAP9-4Q9BYQ2 154 aa6.81□□□□□ -1.32
PIF1-208ENST00000560444 LCE4AQ5TA78 99 aa6.78□□□□□ -1.32
PIF1-208ENST00000560444 SYNE1Q8NF91 8797 aaKnown RBP6.77□□□□□ -1.33
PIF1-208ENST00000560444 MT4P47944 62 aa6.71□□□□□ -1.34
PIF1-208ENST00000560444 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
PIF1-208ENST00000560444 KRTAP12-4P60329 112 aa6.68□□□□□ -1.34
PIF1-208ENST00000560444 KRTAP4-6Q9BYQ5 205 aa6.61□□□□□ -1.35
PIF1-208ENST00000560444 LCE1DQ5T752 114 aa6.6□□□□□ -1.35
PIF1-208ENST00000560444 MT3P25713 68 aa6.51□□□□□ -1.37
PIF1-208ENST00000560444 KRTAP6-2Q3LI66 62 aa6.48□□□□□ -1.37
PIF1-208ENST00000560444 HMCN1Q96RW7 5635 aa6.48□□□□□ -1.37
PIF1-208ENST00000560444 KRTAP20-2Q3LI61 65 aa6.44□□□□□ -1.38
PIF1-208ENST00000560444 LCE3DQ9BYE3 92 aa6.43□□□□□ -1.38
PIF1-208ENST00000560444 LCE3EQ5T5B0 92 aa6.28□□□□□ -1.4
PIF1-208ENST00000560444 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
PIF1-208ENST00000560444 KRTAP5-2Q701N4 177 aa6.21□□□□□ -1.42
PIF1-208ENST00000560444 GPR98Q8WXG9 6306 aa6.01□□□□□ -1.45
PIF1-208ENST00000560444 OBSCNQ5VST9 7968 aa5.86□□□□□ -1.47
PIF1-208ENST00000560444 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
PIF1-208ENST00000560444 KRTAP4-11Q9BYQ6 195 aa5.64□□□□□ -1.51
PIF1-208ENST00000560444 LCE1EQ5T753 118 aa5.61□□□□□ -1.51
PIF1-208ENST00000560444 KRTAP5-10Q6L8G5 202 aa5.59□□□□□ -1.52
PIF1-208ENST00000560444 PRM1P04553 51 aa5.56□□□□□ -1.52
PIF1-208ENST00000560444 KRTAP5-8O75690 187 aa5.43□□□□□ -1.54
PIF1-208ENST00000560444 KRTAP5-1Q6L8H4 278 aa5.38□□□□□ -1.55
PIF1-208ENST00000560444 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
PIF1-208ENST00000560444 MUC5ACP98088 5654 aa5.24□□□□□ -1.57
PIF1-208ENST00000560444 LCE1CQ5T751 118 aa5.22□□□□□ -1.57
PIF1-208ENST00000560444 LCE1BQ5T7P3 118 aa5.22□□□□□ -1.57
PIF1-208ENST00000560444 KRTAP4-2Q9BYR5 136 aa5.17□□□□□ -1.58
PIF1-208ENST00000560444 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
PIF1-208ENST00000560444 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.91□□□□□ -1.62
PIF1-208ENST00000560444 AHNAKQ09666 5890 aaKnown RBP4.71□□□□□ -1.65
PIF1-208ENST00000560444 MUC5BQ9HC84 5762 aaPredicted RBP4.71□□□□□ -1.66
PIF1-208ENST00000560444 KRTAP21-2Q3LI59 83 aa4.64□□□□□ -1.67
PIF1-208ENST00000560444 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
PIF1-208ENST00000560444 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
PIF1-208ENST00000560444 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
PIF1-208ENST00000560444 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
PIF1-208ENST00000560444 PHGR1C9JFL3 82 aa3.92□□□□□ -1.78
PIF1-208ENST00000560444 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
PIF1-208ENST00000560444 KRTAP21-1Q3LI58 79 aa3.47□□□□□ -1.85
PIF1-208ENST00000560444 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 64.9 ms