RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
HMBOX1-214ENST00000560357 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
HMBOX1-214ENST00000560357 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
HMBOX1-214ENST00000560357 FSIP2Q5CZC0 6907 aa2.96□□□□□ -1.93
HMBOX1-214ENST00000560357 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
HMBOX1-214ENST00000560357 CRCT1Q9UGL9 99 aa2.94□□□□□ -1.94
HMBOX1-214ENST00000560357 MT3P25713 68 aa2.91□□□□□ -1.94
HMBOX1-214ENST00000560357 FCGBPQ9Y6R7 5405 aaPredicted RBP2.9□□□□□ -1.94
HMBOX1-214ENST00000560357 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
HMBOX1-214ENST00000560357 TNP1P09430 55 aa2.89□□□□□ -1.95
HMBOX1-214ENST00000560357 KRTAP10-12P60413 245 aa2.86□□□□□ -1.95
HMBOX1-214ENST00000560357 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
HMBOX1-214ENST00000560357 KMT2DO14686 5537 aa2.78□□□□□ -1.97
HMBOX1-214ENST00000560357 PP632Q6XCG6 107 aa2.76□□□□□ -1.97
HMBOX1-214ENST00000560357 KRTAP8-1Q8IUC2 63 aa2.74□□□□□ -1.97
HMBOX1-214ENST00000560357 MACF1Q9UPN3 7388 aaKnown RBP2.71□□□□□ -1.98
HMBOX1-214ENST00000560357 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
HMBOX1-214ENST00000560357 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
HMBOX1-214ENST00000560357 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
HMBOX1-214ENST00000560357 SYNE2Q8WXH0 6885 aaKnown RBP2.68□□□□□ -1.98
HMBOX1-214ENST00000560357 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
HMBOX1-214ENST00000560357 MT1EP04732 61 aa2.65□□□□□ -1.99
HMBOX1-214ENST00000560357 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
HMBOX1-214ENST00000560357 KRTAP6-3Q3LI67 103 aa2.65□□□□□ -1.99
HMBOX1-214ENST00000560357 SPRR2FQ96RM1 72 aa2.64□□□□□ -1.99
HMBOX1-214ENST00000560357 KRTAP9-6A8MVA2 160 aa2.61□□□□□ -1.99
HMBOX1-214ENST00000560357 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
HMBOX1-214ENST00000560357 MT1LQ93083 61 aa2.59□□□□□ -1.99
HMBOX1-214ENST00000560357 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
HMBOX1-214ENST00000560357 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
HMBOX1-214ENST00000560357 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
HMBOX1-214ENST00000560357 INE1O15225 51 aa2.54□□□□□ -2
HMBOX1-214ENST00000560357 LCE1FQ5T754 118 aa2.54□□□□□ -2
HMBOX1-214ENST00000560357 MT1GP13640 62 aa2.53□□□□□ -2
HMBOX1-214ENST00000560357 SPRR2EP22531 72 aa2.53□□□□□ -2
HMBOX1-214ENST00000560357 SPRR2BP35325 72 aa2.53□□□□□ -2
HMBOX1-214ENST00000560357 SPRR2AP35326 72 aa2.53□□□□□ -2
HMBOX1-214ENST00000560357 MDN1Q9NU22 5596 aa2.53□□□□□ -2
HMBOX1-214ENST00000560357 LCE3CQ5T5A8 94 aa2.51□□□□□ -2.01
HMBOX1-214ENST00000560357 MT1MQ8N339 61 aa2.5□□□□□ -2.01
HMBOX1-214ENST00000560357 NEBP20929 6669 aa2.49□□□□□ -2.01
HMBOX1-214ENST00000560357 KRTAP4-3Q9BYR4 195 aa2.45□□□□□ -2.02
HMBOX1-214ENST00000560357 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
HMBOX1-214ENST00000560357 SPRR2DP22532 72 aa2.43□□□□□ -2.02
HMBOX1-214ENST00000560357 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
HMBOX1-214ENST00000560357 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
HMBOX1-214ENST00000560357 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
HMBOX1-214ENST00000560357 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
HMBOX1-214ENST00000560357 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
HMBOX1-214ENST00000560357 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
HMBOX1-214ENST00000560357 KRTAP2-1Q9BYU5 128 aa2.27□□□□□ -2.05
HMBOX1-214ENST00000560357 MT1AP04731 61 aa2.2□□□□□ -2.06
HMBOX1-214ENST00000560357 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
HMBOX1-214ENST00000560357 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
HMBOX1-214ENST00000560357 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
HMBOX1-214ENST00000560357 MT4P47944 62 aa2.12□□□□□ -2.07
HMBOX1-214ENST00000560357 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
HMBOX1-214ENST00000560357 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.08
HMBOX1-214ENST00000560357 KRTAP20-2Q3LI61 65 aa2.05□□□□□ -2.08
HMBOX1-214ENST00000560357 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
HMBOX1-214ENST00000560357 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
HMBOX1-214ENST00000560357 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
HMBOX1-214ENST00000560357 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
HMBOX1-214ENST00000560357 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
HMBOX1-214ENST00000560357 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
HMBOX1-214ENST00000560357 KRTAP5-10Q6L8G5 202 aa1.79□□□□□ -2.12
HMBOX1-214ENST00000560357 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
HMBOX1-214ENST00000560357 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
HMBOX1-214ENST00000560357 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
HMBOX1-214ENST00000560357 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
HMBOX1-214ENST00000560357 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
HMBOX1-214ENST00000560357 PRM1P04553 51 aa1.53□□□□□ -2.16
HMBOX1-214ENST00000560357 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
HMBOX1-214ENST00000560357 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
HMBOX1-214ENST00000560357 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
HMBOX1-214ENST00000560357 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
HMBOX1-214ENST00000560357 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
HMBOX1-214ENST00000560357 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 120.4 ms