RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 KRTAP5-4Q6L8H1 288 aa6.61□□□□□ -1.35
CDC42BPB-206ENST00000559790 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
CDC42BPB-206ENST00000559790 C10orf95Q9H7T3 257 aa6.52□□□□□ -1.37
CDC42BPB-206ENST00000559790 KRTAP5-10Q6L8G5 202 aa6.49□□□□□ -1.37
CDC42BPB-206ENST00000559790 A0A1B0GU69 56 aa6.47□□□□□ -1.37
CDC42BPB-206ENST00000559790 A8MU10 97 aa6.47□□□□□ -1.37
CDC42BPB-206ENST00000559790 SMIM26A0A096LP01 95 aa6.44□□□□□ -1.38
CDC42BPB-206ENST00000559790 ANAPC13Q9BS18 74 aa6.42□□□□□ -1.38
CDC42BPB-206ENST00000559790 H3BS24 57 aa6.4□□□□□ -1.38
CDC42BPB-206ENST00000559790 KRTAP4-2Q9BYR5 136 aa6.39□□□□□ -1.39
CDC42BPB-206ENST00000559790 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
CDC42BPB-206ENST00000559790 TNP1P09430 55 aa6.33□□□□□ -1.4
CDC42BPB-206ENST00000559790 CCDC179H3BU77 68 aa6.31□□□□□ -1.4
CDC42BPB-206ENST00000559790 KRTAP4-11Q9BYQ6 195 aa6.29□□□□□ -1.4
CDC42BPB-206ENST00000559790 KRTAP5-5Q701N2 237 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPB-206ENST00000559790 KRTAP5-7Q6L8G8 165 aa6.25□□□□□ -1.41
CDC42BPB-206ENST00000559790 KRTAP5-3Q6L8H2 238 aa6.25□□□□□ -1.41
CDC42BPB-206ENST00000559790 ATP5EP56381 51 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPB-206ENST00000559790 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
CDC42BPB-206ENST00000559790 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
CDC42BPB-206ENST00000559790 KRTAP20-2Q3LI61 65 aa6.22□□□□□ -1.41
CDC42BPB-206ENST00000559790 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
CDC42BPB-206ENST00000559790 SPRR5A0A1B0GTR4 108 aa6.11□□□□□ -1.43
CDC42BPB-206ENST00000559790 UQCR11O14957 56 aa6.05□□□□□ -1.44
CDC42BPB-206ENST00000559790 TMEM258P61165 79 aa6.05□□□□□ -1.44
CDC42BPB-206ENST00000559790 SYNE1Q8NF91 8797 aaKnown RBP6.02□□□□□ -1.45
CDC42BPB-206ENST00000559790 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
CDC42BPB-206ENST00000559790 MIR22HGQ0VDD5 57 aa5.9□□□□□ -1.46
CDC42BPB-206ENST00000559790 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
CDC42BPB-206ENST00000559790 K7ERS5 55 aa5.79□□□□□ -1.48
CDC42BPB-206ENST00000559790 KRTAP5-2Q701N4 177 aa5.77□□□□□ -1.49
CDC42BPB-206ENST00000559790 PSPHP1O15172 72 aa5.76□□□□□ -1.49
CDC42BPB-206ENST00000559790 V9GYY9 64 aa5.75□□□□□ -1.49
CDC42BPB-206ENST00000559790 Q1T7F1 81 aa5.72□□□□□ -1.49
CDC42BPB-206ENST00000559790 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
CDC42BPB-206ENST00000559790 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
CDC42BPB-206ENST00000559790 KRTAP6-1Q3LI64 71 aa5.7□□□□□ -1.5
CDC42BPB-206ENST00000559790 MT1AP04731 61 aa5.68□□□□□ -1.5
CDC42BPB-206ENST00000559790 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
CDC42BPB-206ENST00000559790 KRTAP5-8O75690 187 aa5.58□□□□□ -1.52
CDC42BPB-206ENST00000559790 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
CDC42BPB-206ENST00000559790 A6NED7 52 aa5.54□□□□□ -1.52
CDC42BPB-206ENST00000559790 MUC5ACP98088 5654 aa5.5□□□□□ -1.53
CDC42BPB-206ENST00000559790 AHNAKQ09666 5890 aaKnown RBP5.49□□□□□ -1.53
CDC42BPB-206ENST00000559790 CDC42SE1Q9NRR8 79 aa5.48□□□□□ -1.53
CDC42BPB-206ENST00000559790 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
CDC42BPB-206ENST00000559790 MUC5BQ9HC84 5762 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPB-206ENST00000559790 ROMO1P60602 79 aa5.4□□□□□ -1.54
CDC42BPB-206ENST00000559790 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.55
CDC42BPB-206ENST00000559790 RPS28P62857 69 aaKnown RBP5.36□□□□□ -1.55
CDC42BPB-206ENST00000559790 KRTAP5-1Q6L8H4 278 aa5.22□□□□□ -1.57
CDC42BPB-206ENST00000559790 PCP4P48539 62 aa5.15□□□□□ -1.59
CDC42BPB-206ENST00000559790 MT3P25713 68 aa5.12□□□□□ -1.59
CDC42BPB-206ENST00000559790 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
CDC42BPB-206ENST00000559790 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
CDC42BPB-206ENST00000559790 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
CDC42BPB-206ENST00000559790 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
CDC42BPB-206ENST00000559790 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
CDC42BPB-206ENST00000559790 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
CDC42BPB-206ENST00000559790 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
CDC42BPB-206ENST00000559790 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
CDC42BPB-206ENST00000559790 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
CDC42BPB-206ENST00000559790 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
CDC42BPB-206ENST00000559790 PRO0628Q9UI54 55 aa3.92□□□□□ -1.78
CDC42BPB-206ENST00000559790 SVIPQ8NHG7 77 aa3.83□□□□□ -1.8
CDC42BPB-206ENST00000559790 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
CDC42BPB-206ENST00000559790 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
CDC42BPB-206ENST00000559790 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
CDC42BPB-206ENST00000559790 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
CDC42BPB-206ENST00000559790 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
CDC42BPB-206ENST00000559790 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
CDC42BPB-206ENST00000559790 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
CDC42BPB-206ENST00000559790 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
CDC42BPB-206ENST00000559790 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
CDC42BPB-206ENST00000559790 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
CDC42BPB-206ENST00000559790 PRM1P04553 51 aa2.75□□□□□ -1.97
CDC42BPB-206ENST00000559790 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
CDC42BPB-206ENST00000559790 INE1O15225 51 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 119.4 ms