RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 COX7CP15954 63 aa5.3□□□□□ -1.56
LRRC28-213ENST00000559399 MT1LQ93083 61 aa5.3□□□□□ -1.56
LRRC28-213ENST00000559399 SMIM26A0A096LP01 95 aa5.28□□□□□ -1.56
LRRC28-213ENST00000559399 HMCN1Q96RW7 5635 aa5.28□□□□□ -1.56
LRRC28-213ENST00000559399 H7BZZ5 65 aa5.27□□□□□ -1.57
LRRC28-213ENST00000559399 MT4P47944 62 aa5.27□□□□□ -1.57
LRRC28-213ENST00000559399 A0A1B0GU69 56 aa5.26□□□□□ -1.57
LRRC28-213ENST00000559399 A8MU10 97 aa5.23□□□□□ -1.57
LRRC28-213ENST00000559399 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
LRRC28-213ENST00000559399 LCE3AQ5TA76 89 aa5.22□□□□□ -1.57
LRRC28-213ENST00000559399 TNP1P09430 55 aa5.21□□□□□ -1.58
LRRC28-213ENST00000559399 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
LRRC28-213ENST00000559399 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
LRRC28-213ENST00000559399 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
LRRC28-213ENST00000559399 PCP4P48539 62 aa5.12□□□□□ -1.59
LRRC28-213ENST00000559399 AHNAK2Q8IVF2 5795 aa5.1□□□□□ -1.59
LRRC28-213ENST00000559399 KRTAP5-10Q6L8G5 202 aa5.06□□□□□ -1.6
LRRC28-213ENST00000559399 PRR15LQ9BU68 103 aa5.05□□□□□ -1.6
LRRC28-213ENST00000559399 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
LRRC28-213ENST00000559399 ANAPC13Q9BS18 74 aa5.02□□□□□ -1.61
LRRC28-213ENST00000559399 ATP5EP56381 51 aaPredicted RBP4.94□□□□□ -1.62
LRRC28-213ENST00000559399 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
LRRC28-213ENST00000559399 A0A0A0MQY5 61 aa4.92□□□□□ -1.62
LRRC28-213ENST00000559399 CCDC179H3BU77 68 aa4.91□□□□□ -1.62
LRRC28-213ENST00000559399 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.63
LRRC28-213ENST00000559399 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
LRRC28-213ENST00000559399 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
LRRC28-213ENST00000559399 UQCR11O14957 56 aa4.87□□□□□ -1.63
LRRC28-213ENST00000559399 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
LRRC28-213ENST00000559399 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
LRRC28-213ENST00000559399 KRTAP25-1Q3LHN0 102 aa4.83□□□□□ -1.64
LRRC28-213ENST00000559399 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
LRRC28-213ENST00000559399 TMEM258P61165 79 aa4.73□□□□□ -1.65
LRRC28-213ENST00000559399 K7ERS5 55 aa4.71□□□□□ -1.66
LRRC28-213ENST00000559399 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
LRRC28-213ENST00000559399 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
LRRC28-213ENST00000559399 PSPHP1O15172 72 aa4.54□□□□□ -1.68
LRRC28-213ENST00000559399 V9GYY9 64 aa4.53□□□□□ -1.68
LRRC28-213ENST00000559399 MT1AP04731 61 aa4.51□□□□□ -1.69
LRRC28-213ENST00000559399 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
LRRC28-213ENST00000559399 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
LRRC28-213ENST00000559399 Q1T7F1 81 aa4.46□□□□□ -1.7
LRRC28-213ENST00000559399 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
LRRC28-213ENST00000559399 A6NED7 52 aa4.39□□□□□ -1.71
LRRC28-213ENST00000559399 KRTAP5-8O75690 187 aa4.36□□□□□ -1.71
LRRC28-213ENST00000559399 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
LRRC28-213ENST00000559399 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
LRRC28-213ENST00000559399 ROMO1P60602 79 aa4.33□□□□□ -1.72
LRRC28-213ENST00000559399 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
LRRC28-213ENST00000559399 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
LRRC28-213ENST00000559399 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
LRRC28-213ENST00000559399 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
LRRC28-213ENST00000559399 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
LRRC28-213ENST00000559399 MT3P25713 68 aa4.14□□□□□ -1.75
LRRC28-213ENST00000559399 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
LRRC28-213ENST00000559399 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
LRRC28-213ENST00000559399 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
LRRC28-213ENST00000559399 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
LRRC28-213ENST00000559399 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
LRRC28-213ENST00000559399 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
LRRC28-213ENST00000559399 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
LRRC28-213ENST00000559399 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
LRRC28-213ENST00000559399 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
LRRC28-213ENST00000559399 BRK1Q8WUW1 75 aa3.54□□□□□ -1.84
LRRC28-213ENST00000559399 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
LRRC28-213ENST00000559399 PMAIP1Q13794 54 aa3.35□□□□□ -1.87
LRRC28-213ENST00000559399 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
LRRC28-213ENST00000559399 PRO0628Q9UI54 55 aa3.26□□□□□ -1.89
LRRC28-213ENST00000559399 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
LRRC28-213ENST00000559399 KTN1-AS1Q86SY8 53 aa3.05□□□□□ -1.92
LRRC28-213ENST00000559399 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
LRRC28-213ENST00000559399 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
LRRC28-213ENST00000559399 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
LRRC28-213ENST00000559399 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
LRRC28-213ENST00000559399 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
LRRC28-213ENST00000559399 PRM1P04553 51 aa2.2□□□□□ -2.06
LRRC28-213ENST00000559399 INE1O15225 51 aa2□□□□□ -2.09
LRRC28-213ENST00000559399 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 32.8 ms