RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 UQCR11O14957 56 aa6.23□□□□□ -1.41
SMAD3-210ENST00000559092 MT1MQ8N339 61 aa6.23□□□□□ -1.41
SMAD3-210ENST00000559092 GPR98Q8WXG9 6306 aa6.18□□□□□ -1.42
SMAD3-210ENST00000559092 KRTAP4-9Q9BYQ8 210 aa6.18□□□□□ -1.42
SMAD3-210ENST00000559092 PSPHP1O15172 72 aa6.09□□□□□ -1.43
SMAD3-210ENST00000559092 LCE4AQ5TA78 99 aa6.09□□□□□ -1.43
SMAD3-210ENST00000559092 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
SMAD3-210ENST00000559092 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
SMAD3-210ENST00000559092 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
SMAD3-210ENST00000559092 KRTAP4-3Q9BYR4 195 aa6.04□□□□□ -1.44
SMAD3-210ENST00000559092 HMCN1Q96RW7 5635 aa6.03□□□□□ -1.44
SMAD3-210ENST00000559092 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
SMAD3-210ENST00000559092 K7ERS5 55 aa6□□□□□ -1.45
SMAD3-210ENST00000559092 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
SMAD3-210ENST00000559092 MT4P47944 62 aa5.97□□□□□ -1.45
SMAD3-210ENST00000559092 A6NED7 52 aa5.94□□□□□ -1.46
SMAD3-210ENST00000559092 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
SMAD3-210ENST00000559092 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
SMAD3-210ENST00000559092 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
SMAD3-210ENST00000559092 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
SMAD3-210ENST00000559092 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
SMAD3-210ENST00000559092 AHNAK2Q8IVF2 5795 aa5.8□□□□□ -1.48
SMAD3-210ENST00000559092 BRK1Q8WUW1 75 aa5.77□□□□□ -1.49
SMAD3-210ENST00000559092 KRTAP5-5Q701N2 237 aaPredicted RBP5.73□□□□□ -1.49
SMAD3-210ENST00000559092 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
SMAD3-210ENST00000559092 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
SMAD3-210ENST00000559092 KRTAP5-10Q6L8G5 202 aa5.64□□□□□ -1.51
SMAD3-210ENST00000559092 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
SMAD3-210ENST00000559092 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
SMAD3-210ENST00000559092 PRO0628Q9UI54 55 aa5.62□□□□□ -1.51
SMAD3-210ENST00000559092 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
SMAD3-210ENST00000559092 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
SMAD3-210ENST00000559092 SYNE1Q8NF91 8797 aaKnown RBP5.59□□□□□ -1.52
SMAD3-210ENST00000559092 ROMO1P60602 79 aa5.56□□□□□ -1.52
SMAD3-210ENST00000559092 KRTAP5-3Q6L8H2 238 aa5.51□□□□□ -1.53
SMAD3-210ENST00000559092 PMAIP1Q13794 54 aa5.48□□□□□ -1.53
SMAD3-210ENST00000559092 KRTAP5-7Q6L8G8 165 aa5.44□□□□□ -1.54
SMAD3-210ENST00000559092 MT1AP04731 61 aa5.34□□□□□ -1.55
SMAD3-210ENST00000559092 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
SMAD3-210ENST00000559092 KRTAP9-6A8MVA2 160 aa5.24□□□□□ -1.57
SMAD3-210ENST00000559092 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
SMAD3-210ENST00000559092 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
SMAD3-210ENST00000559092 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
SMAD3-210ENST00000559092 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
SMAD3-210ENST00000559092 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
SMAD3-210ENST00000559092 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
SMAD3-210ENST00000559092 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
SMAD3-210ENST00000559092 KRTAP5-8O75690 187 aa4.96□□□□□ -1.62
SMAD3-210ENST00000559092 MT3P25713 68 aa4.91□□□□□ -1.62
SMAD3-210ENST00000559092 SVIPQ8NHG7 77 aa4.88□□□□□ -1.63
SMAD3-210ENST00000559092 AHNAKQ09666 5890 aaKnown RBP4.82□□□□□ -1.64
SMAD3-210ENST00000559092 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
SMAD3-210ENST00000559092 MUC5ACP98088 5654 aa4.78□□□□□ -1.64
SMAD3-210ENST00000559092 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
SMAD3-210ENST00000559092 KRTAP5-1Q6L8H4 278 aa4.68□□□□□ -1.66
SMAD3-210ENST00000559092 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
SMAD3-210ENST00000559092 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
SMAD3-210ENST00000559092 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
SMAD3-210ENST00000559092 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
SMAD3-210ENST00000559092 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
SMAD3-210ENST00000559092 H3BS24 57 aa4.12□□□□□ -1.75
SMAD3-210ENST00000559092 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
SMAD3-210ENST00000559092 NDUFAF8A1L188 74 aa4□□□□□ -1.77
SMAD3-210ENST00000559092 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
SMAD3-210ENST00000559092 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
SMAD3-210ENST00000559092 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
SMAD3-210ENST00000559092 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
SMAD3-210ENST00000559092 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
SMAD3-210ENST00000559092 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
SMAD3-210ENST00000559092 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
SMAD3-210ENST00000559092 INE1O15225 51 aa3.37□□□□□ -1.87
SMAD3-210ENST00000559092 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
SMAD3-210ENST00000559092 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
SMAD3-210ENST00000559092 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
SMAD3-210ENST00000559092 PRM1P04553 51 aa2.81□□□□□ -1.96
SMAD3-210ENST00000559092 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
SMAD3-210ENST00000559092 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 134.9 ms