RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
CHRNA3-205ENST00000559080 KRTAP4-6Q9BYQ5 205 aa4.06□□□□□ -1.76
CHRNA3-205ENST00000559080 TNP1P09430 55 aa4.05□□□□□ -1.76
CHRNA3-205ENST00000559080 MT1GP13640 62 aa4.05□□□□□ -1.76
CHRNA3-205ENST00000559080 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
CHRNA3-205ENST00000559080 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
CHRNA3-205ENST00000559080 LINC01558Q9Y6Z2 57 aa4.02□□□□□ -1.77
CHRNA3-205ENST00000559080 TMEM258P61165 79 aa4.01□□□□□ -1.77
CHRNA3-205ENST00000559080 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
CHRNA3-205ENST00000559080 LCE3AQ5TA76 89 aa4□□□□□ -1.77
CHRNA3-205ENST00000559080 MT1MQ8N339 61 aa3.98□□□□□ -1.77
CHRNA3-205ENST00000559080 MT1LQ93083 61 aa3.97□□□□□ -1.77
CHRNA3-205ENST00000559080 UQCR11O14957 56 aa3.96□□□□□ -1.78
CHRNA3-205ENST00000559080 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
CHRNA3-205ENST00000559080 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
CHRNA3-205ENST00000559080 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
CHRNA3-205ENST00000559080 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
CHRNA3-205ENST00000559080 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
CHRNA3-205ENST00000559080 K7ERS5 55 aa3.84□□□□□ -1.79
CHRNA3-205ENST00000559080 PCP4P48539 62 aa3.84□□□□□ -1.79
CHRNA3-205ENST00000559080 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
CHRNA3-205ENST00000559080 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
CHRNA3-205ENST00000559080 V9GYY9 64 aa3.81□□□□□ -1.8
CHRNA3-205ENST00000559080 PSPHP1O15172 72 aa3.78□□□□□ -1.8
CHRNA3-205ENST00000559080 KRTAP4-7Q9BYR0 210 aa3.75□□□□□ -1.81
CHRNA3-205ENST00000559080 Q1T7F1 81 aa3.74□□□□□ -1.81
CHRNA3-205ENST00000559080 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
CHRNA3-205ENST00000559080 A6NED7 52 aa3.67□□□□□ -1.82
CHRNA3-205ENST00000559080 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
CHRNA3-205ENST00000559080 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
CHRNA3-205ENST00000559080 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
CHRNA3-205ENST00000559080 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
CHRNA3-205ENST00000559080 CDC42SE1Q9NRR8 79 aa3.61□□□□□ -1.83
CHRNA3-205ENST00000559080 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
CHRNA3-205ENST00000559080 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
CHRNA3-205ENST00000559080 LOC100996750A0A140TA64 210 aa3.56□□□□□ -1.84
CHRNA3-205ENST00000559080 ROMO1P60602 79 aa3.53□□□□□ -1.84
CHRNA3-205ENST00000559080 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
CHRNA3-205ENST00000559080 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
CHRNA3-205ENST00000559080 RPS28P62857 69 aaKnown RBP3.51□□□□□ -1.85
CHRNA3-205ENST00000559080 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
CHRNA3-205ENST00000559080 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
CHRNA3-205ENST00000559080 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
CHRNA3-205ENST00000559080 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
CHRNA3-205ENST00000559080 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
CHRNA3-205ENST00000559080 MT1AP04731 61 aa3.38□□□□□ -1.87
CHRNA3-205ENST00000559080 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
CHRNA3-205ENST00000559080 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
CHRNA3-205ENST00000559080 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
CHRNA3-205ENST00000559080 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
CHRNA3-205ENST00000559080 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
CHRNA3-205ENST00000559080 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
CHRNA3-205ENST00000559080 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
CHRNA3-205ENST00000559080 PRO0628Q9UI54 55 aa3.17□□□□□ -1.9
CHRNA3-205ENST00000559080 BRK1Q8WUW1 75 aa3.12□□□□□ -1.91
CHRNA3-205ENST00000559080 MT3P25713 68 aa3.1□□□□□ -1.91
CHRNA3-205ENST00000559080 PRAC1Q96KF2 57 aa3□□□□□ -1.93
CHRNA3-205ENST00000559080 PMAIP1Q13794 54 aa2.95□□□□□ -1.94
CHRNA3-205ENST00000559080 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
CHRNA3-205ENST00000559080 KTN1-AS1Q86SY8 53 aa2.89□□□□□ -1.95
CHRNA3-205ENST00000559080 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
CHRNA3-205ENST00000559080 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
CHRNA3-205ENST00000559080 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
CHRNA3-205ENST00000559080 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
CHRNA3-205ENST00000559080 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
CHRNA3-205ENST00000559080 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
CHRNA3-205ENST00000559080 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
CHRNA3-205ENST00000559080 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
CHRNA3-205ENST00000559080 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
CHRNA3-205ENST00000559080 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
CHRNA3-205ENST00000559080 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
CHRNA3-205ENST00000559080 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
CHRNA3-205ENST00000559080 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
CHRNA3-205ENST00000559080 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
CHRNA3-205ENST00000559080 INE1O15225 51 aa1.97□□□□□ -2.09
CHRNA3-205ENST00000559080 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
CHRNA3-205ENST00000559080 PRM1P04553 51 aa1.8□□□□□ -2.12
CHRNA3-205ENST00000559080 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 48.6 ms