RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 SPRR2BP35325 72 aa2.38□□□□□ -2.03
CTDSPL2-204ENST00000558966 SPRR2AP35326 72 aa2.38□□□□□ -2.03
CTDSPL2-204ENST00000558966 V9GYY9 64 aa2.38□□□□□ -2.03
CTDSPL2-204ENST00000558966 ANAPC13Q9BS18 74 aa2.35□□□□□ -2.03
CTDSPL2-204ENST00000558966 SERP1Q9Y6X1 66 aa2.35□□□□□ -2.03
CTDSPL2-204ENST00000558966 PSPHP1O15172 72 aa2.35□□□□□ -2.03
CTDSPL2-204ENST00000558966 SPATA8Q6RVD6 105 aa2.35□□□□□ -2.03
CTDSPL2-204ENST00000558966 A0A0D9SG42 100 aa2.34□□□□□ -2.03
CTDSPL2-204ENST00000558966 A0A1B0GU33 70 aa2.33□□□□□ -2.04
CTDSPL2-204ENST00000558966 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
CTDSPL2-204ENST00000558966 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
CTDSPL2-204ENST00000558966 CCDC179H3BU77 68 aa2.33□□□□□ -2.04
CTDSPL2-204ENST00000558966 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
CTDSPL2-204ENST00000558966 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
CTDSPL2-204ENST00000558966 SPRR2DP22532 72 aa2.3□□□□□ -2.04
CTDSPL2-204ENST00000558966 A0A1B0GU69 56 aa2.29□□□□□ -2.04
CTDSPL2-204ENST00000558966 SPINT4Q6UDR6 99 aa2.29□□□□□ -2.04
CTDSPL2-204ENST00000558966 ATP5EP56381 51 aaPredicted RBP2.27□□□□□ -2.05
CTDSPL2-204ENST00000558966 PRO0628Q9UI54 55 aa2.27□□□□□ -2.05
CTDSPL2-204ENST00000558966 KRTAP19-7Q3SYF9 63 aa2.26□□□□□ -2.05
CTDSPL2-204ENST00000558966 KRTAP2-1Q9BYU5 128 aa2.26□□□□□ -2.05
CTDSPL2-204ENST00000558966 MT1EP04732 61 aa2.24□□□□□ -2.05
CTDSPL2-204ENST00000558966 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
CTDSPL2-204ENST00000558966 LINC01558Q9Y6Z2 57 aa2.23□□□□□ -2.05
CTDSPL2-204ENST00000558966 TMEM258P61165 79 aa2.22□□□□□ -2.05
CTDSPL2-204ENST00000558966 PRR15LQ9BU68 103 aa2.22□□□□□ -2.05
CTDSPL2-204ENST00000558966 KRTAP19-5Q3LI72 72 aa2.21□□□□□ -2.06
CTDSPL2-204ENST00000558966 KRTAP19-3Q7Z4W3 81 aa2.21□□□□□ -2.06
CTDSPL2-204ENST00000558966 C10orf95Q9H7T3 257 aa2.2□□□□□ -2.06
CTDSPL2-204ENST00000558966 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
CTDSPL2-204ENST00000558966 SPRR5A0A1B0GTR4 108 aa2.18□□□□□ -2.06
CTDSPL2-204ENST00000558966 LCE3AQ5TA76 89 aa2.17□□□□□ -2.06
CTDSPL2-204ENST00000558966 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
CTDSPL2-204ENST00000558966 TNP1P09430 55 aa2.16□□□□□ -2.06
CTDSPL2-204ENST00000558966 UQCR11O14957 56 aa2.16□□□□□ -2.06
CTDSPL2-204ENST00000558966 MT1GP13640 62 aa2.15□□□□□ -2.07
CTDSPL2-204ENST00000558966 MT1LQ93083 61 aa2.15□□□□□ -2.07
CTDSPL2-204ENST00000558966 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
CTDSPL2-204ENST00000558966 MT1MQ8N339 61 aa2.14□□□□□ -2.07
CTDSPL2-204ENST00000558966 PP632Q6XCG6 107 aa2.12□□□□□ -2.07
CTDSPL2-204ENST00000558966 MIR22HGQ0VDD5 57 aa2.11□□□□□ -2.07
CTDSPL2-204ENST00000558966 K7ERS5 55 aa2.1□□□□□ -2.07
CTDSPL2-204ENST00000558966 Q1T7F1 81 aa2.09□□□□□ -2.08
CTDSPL2-204ENST00000558966 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
CTDSPL2-204ENST00000558966 A6NED7 52 aa2.07□□□□□ -2.08
CTDSPL2-204ENST00000558966 KRTAP25-1Q3LHN0 102 aa2.06□□□□□ -2.08
CTDSPL2-204ENST00000558966 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
CTDSPL2-204ENST00000558966 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
CTDSPL2-204ENST00000558966 MT4P47944 62 aa2.01□□□□□ -2.09
CTDSPL2-204ENST00000558966 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
CTDSPL2-204ENST00000558966 RPS28P62857 69 aaKnown RBP1.99□□□□□ -2.09
CTDSPL2-204ENST00000558966 KRTAP5-5Q701N2 237 aaPredicted RBP1.96□□□□□ -2.1
CTDSPL2-204ENST00000558966 CDC42SE1Q9NRR8 79 aa1.95□□□□□ -2.1
CTDSPL2-204ENST00000558966 ROMO1P60602 79 aa1.93□□□□□ -2.1
CTDSPL2-204ENST00000558966 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
CTDSPL2-204ENST00000558966 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.1
CTDSPL2-204ENST00000558966 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
CTDSPL2-204ENST00000558966 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
CTDSPL2-204ENST00000558966 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
CTDSPL2-204ENST00000558966 MT1AP04731 61 aa1.82□□□□□ -2.12
CTDSPL2-204ENST00000558966 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
CTDSPL2-204ENST00000558966 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
CTDSPL2-204ENST00000558966 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
CTDSPL2-204ENST00000558966 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
CTDSPL2-204ENST00000558966 BRK1Q8WUW1 75 aa1.75□□□□□ -2.13
CTDSPL2-204ENST00000558966 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
CTDSPL2-204ENST00000558966 PMAIP1Q13794 54 aa1.67□□□□□ -2.14
CTDSPL2-204ENST00000558966 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
CTDSPL2-204ENST00000558966 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
CTDSPL2-204ENST00000558966 KTN1-AS1Q86SY8 53 aa1.6□□□□□ -2.15
CTDSPL2-204ENST00000558966 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
CTDSPL2-204ENST00000558966 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
CTDSPL2-204ENST00000558966 INE1O15225 51 aa1.16□□□□□ -2.22
CTDSPL2-204ENST00000558966 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
CTDSPL2-204ENST00000558966 PRM1P04553 51 aa1□□□□□ -2.25
CTDSPL2-204ENST00000558966 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
CTDSPL2-204ENST00000558966 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms