RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 GPR98Q8WXG9 6306 aa7.55□□□□□ -1.2
CRNDE-205ENST00000558952 MIR22HGQ0VDD5 57 aa7.46□□□□□ -1.22
CRNDE-205ENST00000558952 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
CRNDE-205ENST00000558952 LCE4AQ5TA78 99 aa7.42□□□□□ -1.22
CRNDE-205ENST00000558952 KRTAP4-3Q9BYR4 195 aa7.41□□□□□ -1.22
CRNDE-205ENST00000558952 LCE1DQ5T752 114 aa7.4□□□□□ -1.22
CRNDE-205ENST00000558952 K7ERS5 55 aa7.38□□□□□ -1.23
CRNDE-205ENST00000558952 V9GYY9 64 aa7.35□□□□□ -1.23
CRNDE-205ENST00000558952 MT4P47944 62 aa7.34□□□□□ -1.23
CRNDE-205ENST00000558952 KRTAP25-1Q3LHN0 102 aa7.33□□□□□ -1.24
CRNDE-205ENST00000558952 PSPHP1O15172 72 aa7.29□□□□□ -1.24
CRNDE-205ENST00000558952 KRTAP4-7Q9BYR0 210 aa7.25□□□□□ -1.25
CRNDE-205ENST00000558952 Q1T7F1 81 aa7.24□□□□□ -1.25
CRNDE-205ENST00000558952 KRTAP5-4Q6L8H1 288 aa7.24□□□□□ -1.25
CRNDE-205ENST00000558952 HMCN1Q96RW7 5635 aa7.23□□□□□ -1.25
CRNDE-205ENST00000558952 KRTAP4-6Q9BYQ5 205 aa7.1□□□□□ -1.27
CRNDE-205ENST00000558952 A6NED7 52 aa7.07□□□□□ -1.28
CRNDE-205ENST00000558952 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
CRNDE-205ENST00000558952 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
CRNDE-205ENST00000558952 KRTAP5-5Q701N2 237 aaPredicted RBP6.96□□□□□ -1.3
CRNDE-205ENST00000558952 AHNAK2Q8IVF2 5795 aa6.96□□□□□ -1.3
CRNDE-205ENST00000558952 CDC42SE1Q9NRR8 79 aa6.95□□□□□ -1.3
CRNDE-205ENST00000558952 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
CRNDE-205ENST00000558952 KRTAP5-10Q6L8G5 202 aa6.9□□□□□ -1.3
CRNDE-205ENST00000558952 LOC100996750A0A140TA64 210 aa6.87□□□□□ -1.31
CRNDE-205ENST00000558952 KRTAP20-2Q3LI61 65 aa6.86□□□□□ -1.31
CRNDE-205ENST00000558952 KRTAP12-4P60329 112 aa6.85□□□□□ -1.31
CRNDE-205ENST00000558952 SPRR5A0A1B0GTR4 108 aa6.84□□□□□ -1.31
CRNDE-205ENST00000558952 ROMO1P60602 79 aa6.82□□□□□ -1.32
CRNDE-205ENST00000558952 RPS28P62857 69 aaKnown RBP6.82□□□□□ -1.32
CRNDE-205ENST00000558952 LCE3CQ5T5A8 94 aa6.82□□□□□ -1.32
CRNDE-205ENST00000558952 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
CRNDE-205ENST00000558952 PCP4P48539 62 aa6.68□□□□□ -1.34
CRNDE-205ENST00000558952 KRTAP5-7Q6L8G8 165 aa6.66□□□□□ -1.34
CRNDE-205ENST00000558952 SYNE1Q8NF91 8797 aaKnown RBP6.65□□□□□ -1.35
CRNDE-205ENST00000558952 MT1AP04731 61 aa6.51□□□□□ -1.37
CRNDE-205ENST00000558952 KRTAP6-1Q3LI64 71 aa6.46□□□□□ -1.38
CRNDE-205ENST00000558952 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
CRNDE-205ENST00000558952 KRTAP5-2Q701N4 177 aa6.34□□□□□ -1.39
CRNDE-205ENST00000558952 KRTAP9-4Q9BYQ2 154 aa6.29□□□□□ -1.4
CRNDE-205ENST00000558952 KRTAP4-11Q9BYQ6 195 aa6.26□□□□□ -1.41
CRNDE-205ENST00000558952 KRTAP6-2Q3LI66 62 aa6.18□□□□□ -1.42
CRNDE-205ENST00000558952 KRTAP5-8O75690 187 aa6.03□□□□□ -1.44
CRNDE-205ENST00000558952 BRK1Q8WUW1 75 aa6.03□□□□□ -1.44
CRNDE-205ENST00000558952 MT3P25713 68 aa5.98□□□□□ -1.45
CRNDE-205ENST00000558952 OBSCNQ5VST9 7968 aa5.87□□□□□ -1.47
CRNDE-205ENST00000558952 MUC5ACP98088 5654 aa5.82□□□□□ -1.48
CRNDE-205ENST00000558952 AHNAKQ09666 5890 aaKnown RBP5.79□□□□□ -1.48
CRNDE-205ENST00000558952 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
CRNDE-205ENST00000558952 MUC5BQ9HC84 5762 aaPredicted RBP5.74□□□□□ -1.49
CRNDE-205ENST00000558952 KRTAP5-1Q6L8H4 278 aa5.68□□□□□ -1.5
CRNDE-205ENST00000558952 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
CRNDE-205ENST00000558952 LCE1EQ5T753 118 aa5.47□□□□□ -1.53
CRNDE-205ENST00000558952 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
CRNDE-205ENST00000558952 LCE1BQ5T7P3 118 aa5.18□□□□□ -1.58
CRNDE-205ENST00000558952 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
CRNDE-205ENST00000558952 PRO0628Q9UI54 55 aa5.14□□□□□ -1.59
CRNDE-205ENST00000558952 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
CRNDE-205ENST00000558952 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
CRNDE-205ENST00000558952 KTN1-AS1Q86SY8 53 aa4.96□□□□□ -1.62
CRNDE-205ENST00000558952 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
CRNDE-205ENST00000558952 H3BS24 57 aa4.88□□□□□ -1.63
CRNDE-205ENST00000558952 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
CRNDE-205ENST00000558952 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
CRNDE-205ENST00000558952 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
CRNDE-205ENST00000558952 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
CRNDE-205ENST00000558952 KRTAP5-11Q6L8G4 156 aa4.59□□□□□ -1.67
CRNDE-205ENST00000558952 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
CRNDE-205ENST00000558952 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
CRNDE-205ENST00000558952 PHGR1C9JFL3 82 aa4.03□□□□□ -1.76
CRNDE-205ENST00000558952 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
CRNDE-205ENST00000558952 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
CRNDE-205ENST00000558952 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
CRNDE-205ENST00000558952 PRM1P04553 51 aa3.47□□□□□ -1.85
CRNDE-205ENST00000558952 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
CRNDE-205ENST00000558952 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
CRNDE-205ENST00000558952 INE1O15225 51 aa2.9□□□□□ -1.95
CRNDE-205ENST00000558952 MUC16Q8WXI7 14507 aa2.63□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 37.5 ms