RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
TRAF3-206ENST00000558880 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
TRAF3-206ENST00000558880 SMIM26A0A096LP01 95 aa3.03□□□□□ -1.92
TRAF3-206ENST00000558880 LINC01554Q52M75 96 aa3.03□□□□□ -1.92
TRAF3-206ENST00000558880 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
TRAF3-206ENST00000558880 SEC61GP60059 68 aa3.02□□□□□ -1.93
TRAF3-206ENST00000558880 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
TRAF3-206ENST00000558880 KRTAP12-1P59990 96 aa3.01□□□□□ -1.93
TRAF3-206ENST00000558880 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
TRAF3-206ENST00000558880 PRR15LQ9BU68 103 aa3□□□□□ -1.93
TRAF3-206ENST00000558880 PSPHP1O15172 72 aa2.99□□□□□ -1.93
TRAF3-206ENST00000558880 A0A0D9SG42 100 aa2.98□□□□□ -1.93
TRAF3-206ENST00000558880 SPRR2EP22531 72 aa2.98□□□□□ -1.93
TRAF3-206ENST00000558880 SPRR2BP35325 72 aa2.98□□□□□ -1.93
TRAF3-206ENST00000558880 SPRR2AP35326 72 aa2.98□□□□□ -1.93
TRAF3-206ENST00000558880 PLAC4Q8WY50 150 aa2.96□□□□□ -1.94
TRAF3-206ENST00000558880 V9GYY9 64 aa2.96□□□□□ -1.94
TRAF3-206ENST00000558880 UQCR11O14957 56 aa2.93□□□□□ -1.94
TRAF3-206ENST00000558880 SPRR2FQ96RM1 72 aa2.92□□□□□ -1.94
TRAF3-206ENST00000558880 MIR22HGQ0VDD5 57 aa2.9□□□□□ -1.95
TRAF3-206ENST00000558880 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
TRAF3-206ENST00000558880 SPINT4Q6UDR6 99 aa2.9□□□□□ -1.95
TRAF3-206ENST00000558880 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
TRAF3-206ENST00000558880 SPRR2DP22532 72 aa2.88□□□□□ -1.95
TRAF3-206ENST00000558880 C10orf95Q9H7T3 257 aa2.88□□□□□ -1.95
TRAF3-206ENST00000558880 PRO2289Q9P1D8 64 aa2.88□□□□□ -1.95
TRAF3-206ENST00000558880 CAMK2N1Q7Z7J9 78 aa2.85□□□□□ -1.95
TRAF3-206ENST00000558880 A6NED7 52 aa2.84□□□□□ -1.95
TRAF3-206ENST00000558880 CDC42SE1Q9NRR8 79 aa2.81□□□□□ -1.96
TRAF3-206ENST00000558880 KRTAP8-1Q8IUC2 63 aa2.79□□□□□ -1.96
TRAF3-206ENST00000558880 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.96
TRAF3-206ENST00000558880 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
TRAF3-206ENST00000558880 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
TRAF3-206ENST00000558880 TNP1P09430 55 aa2.7□□□□□ -1.98
TRAF3-206ENST00000558880 K7ERS5 55 aa2.69□□□□□ -1.98
TRAF3-206ENST00000558880 MT1EP04732 61 aa2.68□□□□□ -1.98
TRAF3-206ENST00000558880 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
TRAF3-206ENST00000558880 BRK1Q8WUW1 75 aa2.68□□□□□ -1.98
TRAF3-206ENST00000558880 KRTAP25-1Q3LHN0 102 aa2.67□□□□□ -1.98
TRAF3-206ENST00000558880 ROMO1P60602 79 aa2.66□□□□□ -1.98
TRAF3-206ENST00000558880 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
TRAF3-206ENST00000558880 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
TRAF3-206ENST00000558880 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
TRAF3-206ENST00000558880 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
TRAF3-206ENST00000558880 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -1.99
TRAF3-206ENST00000558880 MT1LQ93083 61 aa2.59□□□□□ -1.99
TRAF3-206ENST00000558880 KRTAP12-3P60328 96 aa2.58□□□□□ -2
TRAF3-206ENST00000558880 MT4P47944 62 aa2.57□□□□□ -2
TRAF3-206ENST00000558880 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
TRAF3-206ENST00000558880 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
TRAF3-206ENST00000558880 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
TRAF3-206ENST00000558880 PRO0628Q9UI54 55 aa2.54□□□□□ -2
TRAF3-206ENST00000558880 MT1GP13640 62 aa2.53□□□□□ -2
TRAF3-206ENST00000558880 MT1MQ8N339 61 aa2.53□□□□□ -2
TRAF3-206ENST00000558880 PMAIP1Q13794 54 aa2.52□□□□□ -2.01
TRAF3-206ENST00000558880 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
TRAF3-206ENST00000558880 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
TRAF3-206ENST00000558880 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
TRAF3-206ENST00000558880 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
TRAF3-206ENST00000558880 KTN1-AS1Q86SY8 53 aa2.37□□□□□ -2.03
TRAF3-206ENST00000558880 SYNE1Q8NF91 8797 aaKnown RBP2.31□□□□□ -2.04
TRAF3-206ENST00000558880 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
TRAF3-206ENST00000558880 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
TRAF3-206ENST00000558880 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
TRAF3-206ENST00000558880 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
TRAF3-206ENST00000558880 MT1AP04731 61 aa2.19□□□□□ -2.06
TRAF3-206ENST00000558880 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
TRAF3-206ENST00000558880 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
TRAF3-206ENST00000558880 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
TRAF3-206ENST00000558880 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
TRAF3-206ENST00000558880 KRTAP6-2Q3LI66 62 aa2.03□□□□□ -2.08
TRAF3-206ENST00000558880 LUZP6Q538Z0 58 aa1.87□□□□□ -2.11
TRAF3-206ENST00000558880 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
TRAF3-206ENST00000558880 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
TRAF3-206ENST00000558880 INE1O15225 51 aa1.46□□□□□ -2.18
TRAF3-206ENST00000558880 PRM1P04553 51 aa1.4□□□□□ -2.19
TRAF3-206ENST00000558880 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
TRAF3-206ENST00000558880 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 73.9 ms