RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
PSMA4-207ENST00000558635 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
PSMA4-207ENST00000558635 MIR22HGQ0VDD5 57 aa4.16□□□□□ -1.74
PSMA4-207ENST00000558635 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
PSMA4-207ENST00000558635 KMT2DO14686 5537 aa4.16□□□□□ -1.74
PSMA4-207ENST00000558635 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
PSMA4-207ENST00000558635 K7ERS5 55 aa4.1□□□□□ -1.75
PSMA4-207ENST00000558635 A6NED7 52 aa4.09□□□□□ -1.75
PSMA4-207ENST00000558635 KRTAP8-1Q8IUC2 63 aa4.08□□□□□ -1.76
PSMA4-207ENST00000558635 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
PSMA4-207ENST00000558635 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
PSMA4-207ENST00000558635 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
PSMA4-207ENST00000558635 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
PSMA4-207ENST00000558635 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
PSMA4-207ENST00000558635 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
PSMA4-207ENST00000558635 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
PSMA4-207ENST00000558635 MDN1Q9NU22 5596 aa4□□□□□ -1.77
PSMA4-207ENST00000558635 TNP1P09430 55 aa3.97□□□□□ -1.77
PSMA4-207ENST00000558635 NEBP20929 6669 aa3.95□□□□□ -1.78
PSMA4-207ENST00000558635 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
PSMA4-207ENST00000558635 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
PSMA4-207ENST00000558635 SPRR2EP22531 72 aa3.9□□□□□ -1.79
PSMA4-207ENST00000558635 SPRR2BP35325 72 aa3.9□□□□□ -1.79
PSMA4-207ENST00000558635 SPRR2AP35326 72 aa3.9□□□□□ -1.79
PSMA4-207ENST00000558635 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
PSMA4-207ENST00000558635 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
PSMA4-207ENST00000558635 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
PSMA4-207ENST00000558635 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
PSMA4-207ENST00000558635 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
PSMA4-207ENST00000558635 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
PSMA4-207ENST00000558635 MT1EP04732 61 aa3.84□□□□□ -1.79
PSMA4-207ENST00000558635 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
PSMA4-207ENST00000558635 ROMO1P60602 79 aa3.81□□□□□ -1.8
PSMA4-207ENST00000558635 BRK1Q8WUW1 75 aa3.78□□□□□ -1.8
PSMA4-207ENST00000558635 SPRR2DP22532 72 aa3.77□□□□□ -1.81
PSMA4-207ENST00000558635 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
PSMA4-207ENST00000558635 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
PSMA4-207ENST00000558635 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
PSMA4-207ENST00000558635 KRTAP2-3P0C7H8 128 aa3.71□□□□□ -1.82
PSMA4-207ENST00000558635 MT1LQ93083 61 aa3.71□□□□□ -1.82
PSMA4-207ENST00000558635 KRTAP2-4Q9BYR9 128 aa3.71□□□□□ -1.82
PSMA4-207ENST00000558635 MT1GP13640 62 aa3.69□□□□□ -1.82
PSMA4-207ENST00000558635 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
PSMA4-207ENST00000558635 MT1MQ8N339 61 aa3.64□□□□□ -1.83
PSMA4-207ENST00000558635 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
PSMA4-207ENST00000558635 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
PSMA4-207ENST00000558635 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
PSMA4-207ENST00000558635 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
PSMA4-207ENST00000558635 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
PSMA4-207ENST00000558635 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
PSMA4-207ENST00000558635 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
PSMA4-207ENST00000558635 MT4P47944 62 aa3.28□□□□□ -1.88
PSMA4-207ENST00000558635 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
PSMA4-207ENST00000558635 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
PSMA4-207ENST00000558635 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
PSMA4-207ENST00000558635 MT1AP04731 61 aa3.15□□□□□ -1.91
PSMA4-207ENST00000558635 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
PSMA4-207ENST00000558635 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
PSMA4-207ENST00000558635 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
PSMA4-207ENST00000558635 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
PSMA4-207ENST00000558635 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.93
PSMA4-207ENST00000558635 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
PSMA4-207ENST00000558635 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
PSMA4-207ENST00000558635 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
PSMA4-207ENST00000558635 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
PSMA4-207ENST00000558635 INE1O15225 51 aa2.91□□□□□ -1.94
PSMA4-207ENST00000558635 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
PSMA4-207ENST00000558635 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
PSMA4-207ENST00000558635 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
PSMA4-207ENST00000558635 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
PSMA4-207ENST00000558635 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
PSMA4-207ENST00000558635 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
PSMA4-207ENST00000558635 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
PSMA4-207ENST00000558635 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
PSMA4-207ENST00000558635 PRM1P04553 51 aa1.96□□□□□ -2.1
PSMA4-207ENST00000558635 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
PSMA4-207ENST00000558635 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
PSMA4-207ENST00000558635 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 50.8 ms