RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 KRTAP12-2P59991 146 aa4.94□□□□□ -1.62
HMGB1P8-201ENST00000558211 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
HMGB1P8-201ENST00000558211 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
HMGB1P8-201ENST00000558211 A6NED7 52 aa4.88□□□□□ -1.63
HMGB1P8-201ENST00000558211 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
HMGB1P8-201ENST00000558211 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
HMGB1P8-201ENST00000558211 K7ERS5 55 aa4.77□□□□□ -1.65
HMGB1P8-201ENST00000558211 KMT2DO14686 5537 aa4.75□□□□□ -1.65
HMGB1P8-201ENST00000558211 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
HMGB1P8-201ENST00000558211 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
HMGB1P8-201ENST00000558211 KRTAP8-1Q8IUC2 63 aa4.7□□□□□ -1.66
HMGB1P8-201ENST00000558211 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
HMGB1P8-201ENST00000558211 TNP1P09430 55 aa4.65□□□□□ -1.67
HMGB1P8-201ENST00000558211 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
HMGB1P8-201ENST00000558211 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
HMGB1P8-201ENST00000558211 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
HMGB1P8-201ENST00000558211 KRTAP4-4Q9BYR3 166 aa4.57□□□□□ -1.68
HMGB1P8-201ENST00000558211 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
HMGB1P8-201ENST00000558211 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
HMGB1P8-201ENST00000558211 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
HMGB1P8-201ENST00000558211 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
HMGB1P8-201ENST00000558211 NEBP20929 6669 aa4.51□□□□□ -1.69
HMGB1P8-201ENST00000558211 ROMO1P60602 79 aa4.5□□□□□ -1.69
HMGB1P8-201ENST00000558211 SPRR2EP22531 72 aa4.48□□□□□ -1.69
HMGB1P8-201ENST00000558211 SPRR2BP35325 72 aa4.48□□□□□ -1.69
HMGB1P8-201ENST00000558211 SPRR2AP35326 72 aa4.48□□□□□ -1.69
HMGB1P8-201ENST00000558211 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
HMGB1P8-201ENST00000558211 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
HMGB1P8-201ENST00000558211 MDN1Q9NU22 5596 aa4.46□□□□□ -1.7
HMGB1P8-201ENST00000558211 MT1EP04732 61 aa4.41□□□□□ -1.7
HMGB1P8-201ENST00000558211 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
HMGB1P8-201ENST00000558211 SPRR2DP22532 72 aa4.32□□□□□ -1.72
HMGB1P8-201ENST00000558211 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
HMGB1P8-201ENST00000558211 PMAIP1Q13794 54 aa4.29□□□□□ -1.72
HMGB1P8-201ENST00000558211 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
HMGB1P8-201ENST00000558211 MT1LQ93083 61 aa4.28□□□□□ -1.72
HMGB1P8-201ENST00000558211 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
HMGB1P8-201ENST00000558211 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
HMGB1P8-201ENST00000558211 MT1GP13640 62 aa4.24□□□□□ -1.73
HMGB1P8-201ENST00000558211 KRTAP2-3P0C7H8 128 aa4.22□□□□□ -1.73
HMGB1P8-201ENST00000558211 KRTAP2-4Q9BYR9 128 aa4.22□□□□□ -1.73
HMGB1P8-201ENST00000558211 MT1MQ8N339 61 aa4.19□□□□□ -1.74
HMGB1P8-201ENST00000558211 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
HMGB1P8-201ENST00000558211 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
HMGB1P8-201ENST00000558211 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P8-201ENST00000558211 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
HMGB1P8-201ENST00000558211 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
HMGB1P8-201ENST00000558211 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
HMGB1P8-201ENST00000558211 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
HMGB1P8-201ENST00000558211 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
HMGB1P8-201ENST00000558211 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
HMGB1P8-201ENST00000558211 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
HMGB1P8-201ENST00000558211 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
HMGB1P8-201ENST00000558211 MT4P47944 62 aa3.78□□□□□ -1.8
HMGB1P8-201ENST00000558211 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
HMGB1P8-201ENST00000558211 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
HMGB1P8-201ENST00000558211 MT1AP04731 61 aa3.64□□□□□ -1.83
HMGB1P8-201ENST00000558211 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
HMGB1P8-201ENST00000558211 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
HMGB1P8-201ENST00000558211 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
HMGB1P8-201ENST00000558211 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
HMGB1P8-201ENST00000558211 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
HMGB1P8-201ENST00000558211 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
HMGB1P8-201ENST00000558211 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
HMGB1P8-201ENST00000558211 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
HMGB1P8-201ENST00000558211 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
HMGB1P8-201ENST00000558211 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
HMGB1P8-201ENST00000558211 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
HMGB1P8-201ENST00000558211 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
HMGB1P8-201ENST00000558211 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
HMGB1P8-201ENST00000558211 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
HMGB1P8-201ENST00000558211 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P8-201ENST00000558211 INE1O15225 51 aa2.56□□□□□ -2
HMGB1P8-201ENST00000558211 PRM1P04553 51 aa2.34□□□□□ -2.03
HMGB1P8-201ENST00000558211 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
HMGB1P8-201ENST00000558211 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
HMGB1P8-201ENST00000558211 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 172.6 ms