RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
CPNE6-204ENST00000557829 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
CPNE6-204ENST00000557829 MUC12Q9UKN1 5478 aa4.74□□□□□ -1.65
CPNE6-204ENST00000557829 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
CPNE6-204ENST00000557829 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.67
CPNE6-204ENST00000557829 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
CPNE6-204ENST00000557829 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
CPNE6-204ENST00000557829 NEBP20929 6669 aa4.61□□□□□ -1.67
CPNE6-204ENST00000557829 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
CPNE6-204ENST00000557829 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
CPNE6-204ENST00000557829 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
CPNE6-204ENST00000557829 KRTAP2-1Q9BYU5 128 aa4.6□□□□□ -1.67
CPNE6-204ENST00000557829 SPRR2FQ96RM1 72 aa4.54□□□□□ -1.68
CPNE6-204ENST00000557829 MT1LQ93083 61 aa4.53□□□□□ -1.68
CPNE6-204ENST00000557829 MT1EP04732 61 aa4.53□□□□□ -1.68
CPNE6-204ENST00000557829 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
CPNE6-204ENST00000557829 SPRR2EP22531 72 aa4.4□□□□□ -1.7
CPNE6-204ENST00000557829 SPRR2BP35325 72 aa4.4□□□□□ -1.7
CPNE6-204ENST00000557829 SPRR2AP35326 72 aa4.4□□□□□ -1.7
CPNE6-204ENST00000557829 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.7
CPNE6-204ENST00000557829 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
CPNE6-204ENST00000557829 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
CPNE6-204ENST00000557829 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
CPNE6-204ENST00000557829 MT1GP13640 62 aa4.28□□□□□ -1.72
CPNE6-204ENST00000557829 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
CPNE6-204ENST00000557829 MT1MQ8N339 61 aa4.26□□□□□ -1.73
CPNE6-204ENST00000557829 SPRR2DP22532 72 aa4.24□□□□□ -1.73
CPNE6-204ENST00000557829 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
CPNE6-204ENST00000557829 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
CPNE6-204ENST00000557829 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
CPNE6-204ENST00000557829 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
CPNE6-204ENST00000557829 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
CPNE6-204ENST00000557829 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
CPNE6-204ENST00000557829 MT1AP04731 61 aa3.94□□□□□ -1.78
CPNE6-204ENST00000557829 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
CPNE6-204ENST00000557829 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
CPNE6-204ENST00000557829 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
CPNE6-204ENST00000557829 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
CPNE6-204ENST00000557829 LCE1DQ5T752 114 aa3.76□□□□□ -1.81
CPNE6-204ENST00000557829 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
CPNE6-204ENST00000557829 MT4P47944 62 aa3.75□□□□□ -1.81
CPNE6-204ENST00000557829 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
CPNE6-204ENST00000557829 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
CPNE6-204ENST00000557829 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
CPNE6-204ENST00000557829 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
CPNE6-204ENST00000557829 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
CPNE6-204ENST00000557829 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
CPNE6-204ENST00000557829 PRM1P04553 51 aa3.56□□□□□ -1.84
CPNE6-204ENST00000557829 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
CPNE6-204ENST00000557829 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
CPNE6-204ENST00000557829 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
CPNE6-204ENST00000557829 MT3P25713 68 aa3.45□□□□□ -1.86
CPNE6-204ENST00000557829 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
CPNE6-204ENST00000557829 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
CPNE6-204ENST00000557829 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
CPNE6-204ENST00000557829 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
CPNE6-204ENST00000557829 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
CPNE6-204ENST00000557829 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
CPNE6-204ENST00000557829 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
CPNE6-204ENST00000557829 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.92
CPNE6-204ENST00000557829 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
CPNE6-204ENST00000557829 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
CPNE6-204ENST00000557829 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
CPNE6-204ENST00000557829 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
CPNE6-204ENST00000557829 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
CPNE6-204ENST00000557829 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
CPNE6-204ENST00000557829 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
CPNE6-204ENST00000557829 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
CPNE6-204ENST00000557829 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
CPNE6-204ENST00000557829 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
CPNE6-204ENST00000557829 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
CPNE6-204ENST00000557829 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
CPNE6-204ENST00000557829 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
CPNE6-204ENST00000557829 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
CPNE6-204ENST00000557829 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
CPNE6-204ENST00000557829 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
CPNE6-204ENST00000557829 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
CPNE6-204ENST00000557829 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 48.8 ms