RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 A8MU10 97 aa4.85□□□□□ -1.63
SLIRP-211ENST00000557623 KRTAP20-1Q3LI63 56 aa4.84□□□□□ -1.63
SLIRP-211ENST00000557623 UQCR11O14957 56 aa4.78□□□□□ -1.64
SLIRP-211ENST00000557623 KRTAP2-3P0C7H8 128 aa4.76□□□□□ -1.65
SLIRP-211ENST00000557623 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
SLIRP-211ENST00000557623 KRTAP2-4Q9BYR9 128 aa4.76□□□□□ -1.65
SLIRP-211ENST00000557623 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
SLIRP-211ENST00000557623 V9GYY9 64 aa4.74□□□□□ -1.65
SLIRP-211ENST00000557623 SPRR2DP22532 72 aa4.72□□□□□ -1.65
SLIRP-211ENST00000557623 TNP1P09430 55 aa4.68□□□□□ -1.66
SLIRP-211ENST00000557623 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
SLIRP-211ENST00000557623 MIR22HGQ0VDD5 57 aa4.67□□□□□ -1.66
SLIRP-211ENST00000557623 Q1T7F1 81 aa4.67□□□□□ -1.66
SLIRP-211ENST00000557623 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
SLIRP-211ENST00000557623 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
SLIRP-211ENST00000557623 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
SLIRP-211ENST00000557623 PSPHP1O15172 72 aa4.64□□□□□ -1.67
SLIRP-211ENST00000557623 MT1EP04732 61 aa4.63□□□□□ -1.67
SLIRP-211ENST00000557623 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
SLIRP-211ENST00000557623 K7ERS5 55 aa4.6□□□□□ -1.67
SLIRP-211ENST00000557623 KRTAP19-5Q3LI72 72 aa4.59□□□□□ -1.67
SLIRP-211ENST00000557623 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
SLIRP-211ENST00000557623 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
SLIRP-211ENST00000557623 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
SLIRP-211ENST00000557623 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
SLIRP-211ENST00000557623 A6NED7 52 aa4.51□□□□□ -1.69
SLIRP-211ENST00000557623 MT1GP13640 62 aa4.51□□□□□ -1.69
SLIRP-211ENST00000557623 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
SLIRP-211ENST00000557623 KRTAP25-1Q3LHN0 102 aa4.48□□□□□ -1.69
SLIRP-211ENST00000557623 MT1LQ93083 61 aa4.45□□□□□ -1.7
SLIRP-211ENST00000557623 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
SLIRP-211ENST00000557623 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
SLIRP-211ENST00000557623 MT1MQ8N339 61 aa4.4□□□□□ -1.71
SLIRP-211ENST00000557623 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
SLIRP-211ENST00000557623 CDC42SE1Q9NRR8 79 aa4.35□□□□□ -1.71
SLIRP-211ENST00000557623 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
SLIRP-211ENST00000557623 ROMO1P60602 79 aa4.27□□□□□ -1.73
SLIRP-211ENST00000557623 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
SLIRP-211ENST00000557623 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
SLIRP-211ENST00000557623 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
SLIRP-211ENST00000557623 MT4P47944 62 aa4.1□□□□□ -1.75
SLIRP-211ENST00000557623 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
SLIRP-211ENST00000557623 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
SLIRP-211ENST00000557623 BRK1Q8WUW1 75 aa4.01□□□□□ -1.77
SLIRP-211ENST00000557623 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
SLIRP-211ENST00000557623 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
SLIRP-211ENST00000557623 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
SLIRP-211ENST00000557623 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
SLIRP-211ENST00000557623 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
SLIRP-211ENST00000557623 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
SLIRP-211ENST00000557623 MT1AP04731 61 aa3.8□□□□□ -1.8
SLIRP-211ENST00000557623 PMAIP1Q13794 54 aa3.78□□□□□ -1.8
SLIRP-211ENST00000557623 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
SLIRP-211ENST00000557623 KRTAP5-10Q6L8G5 202 aa3.76□□□□□ -1.81
SLIRP-211ENST00000557623 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
SLIRP-211ENST00000557623 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
SLIRP-211ENST00000557623 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
SLIRP-211ENST00000557623 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
SLIRP-211ENST00000557623 KRTAP5-7Q6L8G8 165 aa3.61□□□□□ -1.83
SLIRP-211ENST00000557623 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
SLIRP-211ENST00000557623 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
SLIRP-211ENST00000557623 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
SLIRP-211ENST00000557623 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
SLIRP-211ENST00000557623 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
SLIRP-211ENST00000557623 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
SLIRP-211ENST00000557623 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
SLIRP-211ENST00000557623 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
SLIRP-211ENST00000557623 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
SLIRP-211ENST00000557623 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
SLIRP-211ENST00000557623 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
SLIRP-211ENST00000557623 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
SLIRP-211ENST00000557623 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
SLIRP-211ENST00000557623 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
SLIRP-211ENST00000557623 PRM1P04553 51 aa2.18□□□□□ -2.06
SLIRP-211ENST00000557623 INE1O15225 51 aa2.09□□□□□ -2.07
SLIRP-211ENST00000557623 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
SLIRP-211ENST00000557623 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 69.7 ms