RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 MT1GP13640 62 aa7.09□□□□□ -1.27
HIF1A-211ENST00000557446 MT1LQ93083 61 aa7.05□□□□□ -1.28
HIF1A-211ENST00000557446 PP632Q6XCG6 107 aa7.04□□□□□ -1.28
HIF1A-211ENST00000557446 A6NED7 52 aa7.02□□□□□ -1.29
HIF1A-211ENST00000557446 RPS28P62857 69 aaKnown RBP7□□□□□ -1.29
HIF1A-211ENST00000557446 KRTAP25-1Q3LHN0 102 aa6.98□□□□□ -1.29
HIF1A-211ENST00000557446 MT1MQ8N339 61 aa6.98□□□□□ -1.29
HIF1A-211ENST00000557446 KRTAP12-3P60328 96 aa6.94□□□□□ -1.3
HIF1A-211ENST00000557446 DSTQ03001 7570 aaKnown RBP6.93□□□□□ -1.3
HIF1A-211ENST00000557446 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
HIF1A-211ENST00000557446 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
HIF1A-211ENST00000557446 KRTAP4-7Q9BYR0 210 aa6.72□□□□□ -1.33
HIF1A-211ENST00000557446 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.34
HIF1A-211ENST00000557446 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
HIF1A-211ENST00000557446 ROMO1P60602 79 aa6.66□□□□□ -1.34
HIF1A-211ENST00000557446 LCE4AQ5TA78 99 aa6.63□□□□□ -1.35
HIF1A-211ENST00000557446 LCE1DQ5T752 114 aa6.58□□□□□ -1.36
HIF1A-211ENST00000557446 MT4P47944 62 aa6.54□□□□□ -1.36
HIF1A-211ENST00000557446 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
HIF1A-211ENST00000557446 KRTAP5-4Q6L8H1 288 aa6.53□□□□□ -1.36
HIF1A-211ENST00000557446 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
HIF1A-211ENST00000557446 LCE3CQ5T5A8 94 aa6.4□□□□□ -1.38
HIF1A-211ENST00000557446 KRTAP5-5Q701N2 237 aaPredicted RBP6.38□□□□□ -1.39
HIF1A-211ENST00000557446 KRTAP4-6Q9BYQ5 205 aa6.36□□□□□ -1.39
HIF1A-211ENST00000557446 LOC100996750A0A140TA64 210 aa6.35□□□□□ -1.39
HIF1A-211ENST00000557446 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.39
HIF1A-211ENST00000557446 BRK1Q8WUW1 75 aa6.23□□□□□ -1.41
HIF1A-211ENST00000557446 GPR98Q8WXG9 6306 aa6.21□□□□□ -1.41
HIF1A-211ENST00000557446 KRTAP20-2Q3LI61 65 aa6.17□□□□□ -1.42
HIF1A-211ENST00000557446 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
HIF1A-211ENST00000557446 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
HIF1A-211ENST00000557446 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
HIF1A-211ENST00000557446 AHNAK2Q8IVF2 5795 aa6.04□□□□□ -1.44
HIF1A-211ENST00000557446 KRTAP9-6A8MVA2 160 aa6.04□□□□□ -1.44
HIF1A-211ENST00000557446 MT1AP04731 61 aa6.01□□□□□ -1.45
HIF1A-211ENST00000557446 KRTAP5-10Q6L8G5 202 aa6.01□□□□□ -1.45
HIF1A-211ENST00000557446 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.46
HIF1A-211ENST00000557446 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
HIF1A-211ENST00000557446 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
HIF1A-211ENST00000557446 KRTAP5-2Q701N4 177 aa5.77□□□□□ -1.49
HIF1A-211ENST00000557446 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
HIF1A-211ENST00000557446 KRTAP5-7Q6L8G8 165 aa5.74□□□□□ -1.49
HIF1A-211ENST00000557446 PRO0628Q9UI54 55 aa5.74□□□□□ -1.49
HIF1A-211ENST00000557446 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.5
HIF1A-211ENST00000557446 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
HIF1A-211ENST00000557446 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
HIF1A-211ENST00000557446 MT3P25713 68 aa5.47□□□□□ -1.53
HIF1A-211ENST00000557446 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
HIF1A-211ENST00000557446 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
HIF1A-211ENST00000557446 OBSCNQ5VST9 7968 aa5.3□□□□□ -1.56
HIF1A-211ENST00000557446 KRTAP5-1Q6L8H4 278 aa5.13□□□□□ -1.59
HIF1A-211ENST00000557446 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
HIF1A-211ENST00000557446 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
HIF1A-211ENST00000557446 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
HIF1A-211ENST00000557446 MUC5ACP98088 5654 aa4.9□□□□□ -1.63
HIF1A-211ENST00000557446 MUC5BQ9HC84 5762 aaPredicted RBP4.89□□□□□ -1.63
HIF1A-211ENST00000557446 AHNAKQ09666 5890 aaKnown RBP4.82□□□□□ -1.64
HIF1A-211ENST00000557446 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
HIF1A-211ENST00000557446 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
HIF1A-211ENST00000557446 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
HIF1A-211ENST00000557446 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
HIF1A-211ENST00000557446 LCE1CQ5T751 118 aa4.62□□□□□ -1.67
HIF1A-211ENST00000557446 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
HIF1A-211ENST00000557446 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
HIF1A-211ENST00000557446 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
HIF1A-211ENST00000557446 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
HIF1A-211ENST00000557446 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
HIF1A-211ENST00000557446 LCE1FQ5T754 118 aa4□□□□□ -1.77
HIF1A-211ENST00000557446 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
HIF1A-211ENST00000557446 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
HIF1A-211ENST00000557446 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
HIF1A-211ENST00000557446 A0A0A0MQY5 61 aa3.53□□□□□ -1.84
HIF1A-211ENST00000557446 PRM1P04553 51 aa3.43□□□□□ -1.86
HIF1A-211ENST00000557446 INE1O15225 51 aa3.42□□□□□ -1.86
HIF1A-211ENST00000557446 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
HIF1A-211ENST00000557446 H3BS24 57 aa2.94□□□□□ -1.94
HIF1A-211ENST00000557446 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
HIF1A-211ENST00000557446 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 7.4 ms