RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
RDH11-210ENST00000557331 SPATA8Q6RVD6 105 aa3.41□□□□□ -1.86
RDH11-210ENST00000557331 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
RDH11-210ENST00000557331 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
RDH11-210ENST00000557331 SMIM26A0A096LP01 95 aa3.39□□□□□ -1.87
RDH11-210ENST00000557331 SNURFQ9Y675 71 aa3.39□□□□□ -1.87
RDH11-210ENST00000557331 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
RDH11-210ENST00000557331 COA5Q86WW8 74 aa3.36□□□□□ -1.87
RDH11-210ENST00000557331 SERP2Q8N6R1 65 aa3.36□□□□□ -1.87
RDH11-210ENST00000557331 ANAPC13Q9BS18 74 aa3.35□□□□□ -1.87
RDH11-210ENST00000557331 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
RDH11-210ENST00000557331 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.87
RDH11-210ENST00000557331 COX7CP15954 63 aa3.33□□□□□ -1.88
RDH11-210ENST00000557331 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
RDH11-210ENST00000557331 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
RDH11-210ENST00000557331 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
RDH11-210ENST00000557331 PCP4P48539 62 aa3.27□□□□□ -1.89
RDH11-210ENST00000557331 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
RDH11-210ENST00000557331 A0A1B0GU69 56 aa3.24□□□□□ -1.89
RDH11-210ENST00000557331 ATP5EP56381 51 aaPredicted RBP3.24□□□□□ -1.89
RDH11-210ENST00000557331 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
RDH11-210ENST00000557331 A8MU10 97 aa3.2□□□□□ -1.9
RDH11-210ENST00000557331 CCDC179H3BU77 68 aa3.2□□□□□ -1.9
RDH11-210ENST00000557331 TMEM258P61165 79 aa3.2□□□□□ -1.9
RDH11-210ENST00000557331 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
RDH11-210ENST00000557331 H7BZZ5 65 aa3.18□□□□□ -1.9
RDH11-210ENST00000557331 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
RDH11-210ENST00000557331 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.91
RDH11-210ENST00000557331 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.91
RDH11-210ENST00000557331 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
RDH11-210ENST00000557331 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
RDH11-210ENST00000557331 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
RDH11-210ENST00000557331 PRR15LQ9BU68 103 aa3.13□□□□□ -1.91
RDH11-210ENST00000557331 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
RDH11-210ENST00000557331 MT1AP04731 61 aa3.07□□□□□ -1.92
RDH11-210ENST00000557331 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
RDH11-210ENST00000557331 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
RDH11-210ENST00000557331 V9GYY9 64 aa3.04□□□□□ -1.92
RDH11-210ENST00000557331 RPS28P62857 69 aaKnown RBP3.03□□□□□ -1.92
RDH11-210ENST00000557331 KRTAP15-1Q3LI76 137 aa3.03□□□□□ -1.92
RDH11-210ENST00000557331 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
RDH11-210ENST00000557331 UQCR11O14957 56 aa2.98□□□□□ -1.93
RDH11-210ENST00000557331 K7ERS5 55 aa2.96□□□□□ -1.94
RDH11-210ENST00000557331 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
RDH11-210ENST00000557331 Q1T7F1 81 aa2.95□□□□□ -1.94
RDH11-210ENST00000557331 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
RDH11-210ENST00000557331 LINC01558Q9Y6Z2 57 aa2.95□□□□□ -1.94
RDH11-210ENST00000557331 MT3P25713 68 aa2.87□□□□□ -1.95
RDH11-210ENST00000557331 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
RDH11-210ENST00000557331 PSPHP1O15172 72 aa2.85□□□□□ -1.95
RDH11-210ENST00000557331 MIR22HGQ0VDD5 57 aa2.84□□□□□ -1.95
RDH11-210ENST00000557331 A6NED7 52 aa2.83□□□□□ -1.96
RDH11-210ENST00000557331 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
RDH11-210ENST00000557331 CDC42SE1Q9NRR8 79 aa2.76□□□□□ -1.97
RDH11-210ENST00000557331 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
RDH11-210ENST00000557331 BRK1Q8WUW1 75 aa2.71□□□□□ -1.98
RDH11-210ENST00000557331 PRO0628Q9UI54 55 aa2.62□□□□□ -1.99
RDH11-210ENST00000557331 ROMO1P60602 79 aa2.61□□□□□ -1.99
RDH11-210ENST00000557331 PRAC1Q96KF2 57 aa2.59□□□□□ -1.99
RDH11-210ENST00000557331 PMAIP1Q13794 54 aa2.57□□□□□ -2
RDH11-210ENST00000557331 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
RDH11-210ENST00000557331 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
RDH11-210ENST00000557331 KTN1-AS1Q86SY8 53 aa2.46□□□□□ -2.02
RDH11-210ENST00000557331 NDUFAF8A1L188 74 aa2.4□□□□□ -2.03
RDH11-210ENST00000557331 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
RDH11-210ENST00000557331 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
RDH11-210ENST00000557331 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
RDH11-210ENST00000557331 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
RDH11-210ENST00000557331 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
RDH11-210ENST00000557331 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
RDH11-210ENST00000557331 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
RDH11-210ENST00000557331 LCE3EQ5T5B0 92 aa1.98□□□□□ -2.09
RDH11-210ENST00000557331 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
RDH11-210ENST00000557331 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
RDH11-210ENST00000557331 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
RDH11-210ENST00000557331 INE1O15225 51 aa1.63□□□□□ -2.15
RDH11-210ENST00000557331 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
RDH11-210ENST00000557331 PRM1P04553 51 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 73.2 ms