RNA–Protein interactions for RNA: ENST00000557290.1

PSMA3-212, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-212ENST00000557290 GVINP1Q7Z2Y8 2422 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 COL6A5A8TX70 2615 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 CEP295Q9C0D2 2601 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 F8P00451 2351 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 SPTBN4Q9H254 2564 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 CENPEQ02224 2701 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 BIRC6Q9NR09 4857 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 SPTAN1Q13813 2472 aaKnown RBP0.19□□□□□ -2.38
PSMA3-212ENST00000557290 MT2AP02795 61 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 SPRR2AP35326 72 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 MT1XP80297 61 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 MT1MQ8N339 61 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 MAST4O15021 2626 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 ITPR3Q14573 2671 aa0.19□□□□□ -2.38
PSMA3-212ENST00000557290 ANKRD11Q6UB99 2663 aaPredicted RBP0.19□□□□□ -2.38
PSMA3-212ENST00000557290 SETXQ7Z333 2677 aaKnown RBP0.19□□□□□ -2.38
PSMA3-212ENST00000557290 GCN1Q92616 2671 aaKnown RBP0.19□□□□□ -2.38
PSMA3-212ENST00000557290 NSD1Q96L73 2696 aaPredicted RBP0.19□□□□□ -2.38
PSMA3-212ENST00000557290 TEP1Q99973 2627 aaKnown RBP0.18□□□□□ -2.38
PSMA3-212ENST00000557290 HECTD1Q9ULT8 2610 aa0.18□□□□□ -2.38
PSMA3-212ENST00000557290 NCOR1O75376 2440 aa0.18□□□□□ -2.38
PSMA3-212ENST00000557290 HIVEP3Q5T1R4 2406 aa0.18□□□□□ -2.38
PSMA3-212ENST00000557290 IGF2RP11717 2491 aa0.18□□□□□ -2.38
PSMA3-212ENST00000557290 MT1BP07438 61 aa0.18□□□□□ -2.38
PSMA3-212ENST00000557290 SPRR2BP35325 72 aa0.18□□□□□ -2.38
PSMA3-212ENST00000557290 ACANP16112 2415 aa0.18□□□□□ -2.38
PSMA3-212ENST00000557290 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
PSMA3-212ENST00000557290 HMCN2Q8NDA2 5059 aa0.17□□□□□ -2.38
PSMA3-212ENST00000557290 USP9XQ93008 2570 aaPredicted RBP0.17□□□□□ -2.38
PSMA3-212ENST00000557290 FLNCQ14315 2725 aa0.17□□□□□ -2.38
PSMA3-212ENST00000557290 ITPR2Q14571 2701 aa0.17□□□□□ -2.38
PSMA3-212ENST00000557290 NBEAL1Q6ZS30 2694 aa0.17□□□□□ -2.38
PSMA3-212ENST00000557290 BDP1A6H8Y1 2624 aa0.17□□□□□ -2.38
PSMA3-212ENST00000557290 KRTAP19-6Q3LI70 58 aa0.17□□□□□ -2.38
PSMA3-212ENST00000557290 KRTAP19-7Q3SYF9 63 aa0.17□□□□□ -2.38
PSMA3-212ENST00000557290 SPRR2FQ96RM1 72 aa0.17□□□□□ -2.38
PSMA3-212ENST00000557290 RNF213Q63HN8 5207 aa0.17□□□□□ -2.38
PSMA3-212ENST00000557290 SPG11Q96JI7 2443 aa0.17□□□□□ -2.38
PSMA3-212ENST00000557290 TLN1Q9Y490 2541 aaKnown RBP0.17□□□□□ -2.38
PSMA3-212ENST00000557290 TLN2Q9Y4G6 2542 aa0.17□□□□□ -2.38
PSMA3-212ENST00000557290 EPPK1P58107 5090 aaKnown RBP0.17□□□□□ -2.38
PSMA3-212ENST00000557290 PTPN13Q12923 2485 aa0.16□□□□□ -2.38
PSMA3-212ENST00000557290 RIF1Q5UIP0 2472 aaKnown RBP0.16□□□□□ -2.38
PSMA3-212ENST00000557290 USP9YO00507 2555 aaPredicted RBP0.16□□□□□ -2.38
PSMA3-212ENST00000557290 ABCA12Q86UK0 2595 aa0.16□□□□□ -2.38
PSMA3-212ENST00000557290 MYO18BQ8IUG5 2567 aa0.16□□□□□ -2.38
PSMA3-212ENST00000557290 CHD8Q9HCK8 2581 aa0.16□□□□□ -2.38
PSMA3-212ENST00000557290 ABCA13Q86UQ4 5058 aa0.16□□□□□ -2.38
PSMA3-212ENST00000557290 FAM208BQ5VWN6 2430 aa0.16□□□□□ -2.38
PSMA3-212ENST00000557290 ZFYVE26Q68DK2 2539 aa0.16□□□□□ -2.38
PSMA3-212ENST00000557290 SPRR2EP22531 72 aa0.16□□□□□ -2.38
PSMA3-212ENST00000557290 SPRR2DP22532 72 aa0.16□□□□□ -2.38
PSMA3-212ENST00000557290 POLQO75417 2590 aa0.16□□□□□ -2.38
PSMA3-212ENST00000557290 SONP18583 2426 aaKnown RBP0.16□□□□□ -2.38
PSMA3-212ENST00000557290 DMBT1Q9UGM3 2413 aaPredicted RBP0.16□□□□□ -2.38
PSMA3-212ENST00000557290 IGSF10Q6WRI0 2623 aa0.16□□□□□ -2.38
PSMA3-212ENST00000557290 SETD2Q9BYW2 2564 aaPredicted RBP0.15□□□□□ -2.38
PSMA3-212ENST00000557290 PRM1P04553 51 aa0.15□□□□□ -2.39
PSMA3-212ENST00000557290 KRTAP20-1Q3LI63 56 aa0.15□□□□□ -2.39
PSMA3-212ENST00000557290 CEP290O15078 2479 aa0.15□□□□□ -2.39
PSMA3-212ENST00000557290 EPG5Q9HCE0 2579 aa0.15□□□□□ -2.39
PSMA3-212ENST00000557290 JMJD1CQ15652 2540 aa0.15□□□□□ -2.39
PSMA3-212ENST00000557290 ATRQ13535 2644 aa0.15□□□□□ -2.39
PSMA3-212ENST00000557290 MTORP42345 2549 aa0.14□□□□□ -2.39
PSMA3-212ENST00000557290 FASNP49327 2511 aaKnown RBP0.14□□□□□ -2.39
PSMA3-212ENST00000557290 MGAM2Q2M2H8 2515 aa0.14□□□□□ -2.39
PSMA3-212ENST00000557290 LRRK2Q5S007 2527 aa0.14□□□□□ -2.39
PSMA3-212ENST00000557290 FLNBO75369 2602 aaKnown RBP0.14□□□□□ -2.39
PSMA3-212ENST00000557290 FLNAP21333 2647 aaKnown RBP0.14□□□□□ -2.39
PSMA3-212ENST00000557290 KRTAP6-2Q3LI66 62 aa0.14□□□□□ -2.39
PSMA3-212ENST00000557290 ACACBO00763 2458 aa0.14□□□□□ -2.39
PSMA3-212ENST00000557290 STAB2Q8WWQ8 2551 aa0.14□□□□□ -2.39
PSMA3-212ENST00000557290 KRTAP6-1Q3LI64 71 aa0.13□□□□□ -2.39
PSMA3-212ENST00000557290 CCDC168Q8NDH2 2452 aa0.13□□□□□ -2.39
PSMA3-212ENST00000557290 KRTAP20-2Q3LI61 65 aa0.1□□□□□ -2.39
PSMA3-212ENST00000557290 MUC12Q9UKN1 5478 aa0.09□□□□□ -2.39
PSMA3-212ENST00000557290 USH2AO75445 5202 aa0.09□□□□□ -2.39
PSMA3-212ENST00000557290 MT4P47944 62 aa0.08□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms