RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
SRP54-213ENST00000556994 MT1LQ93083 61 aa3.89□□□□□ -1.79
SRP54-213ENST00000556994 MT1EP04732 61 aa3.87□□□□□ -1.79
SRP54-213ENST00000556994 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
SRP54-213ENST00000556994 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
SRP54-213ENST00000556994 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
SRP54-213ENST00000556994 KRTAP19-6Q3LI70 58 aa3.81□□□□□ -1.8
SRP54-213ENST00000556994 FCGBPQ9Y6R7 5405 aaPredicted RBP3.78□□□□□ -1.8
SRP54-213ENST00000556994 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
SRP54-213ENST00000556994 CRCT1Q9UGL9 99 aa3.76□□□□□ -1.81
SRP54-213ENST00000556994 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
SRP54-213ENST00000556994 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
SRP54-213ENST00000556994 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
SRP54-213ENST00000556994 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.82
SRP54-213ENST00000556994 MT1GP13640 62 aa3.71□□□□□ -1.82
SRP54-213ENST00000556994 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.82
SRP54-213ENST00000556994 MACF1Q9UPN3 7388 aaKnown RBP3.61□□□□□ -1.83
SRP54-213ENST00000556994 MT1MQ8N339 61 aa3.61□□□□□ -1.83
SRP54-213ENST00000556994 DSTQ03001 7570 aaKnown RBP3.58□□□□□ -1.84
SRP54-213ENST00000556994 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
SRP54-213ENST00000556994 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
SRP54-213ENST00000556994 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
SRP54-213ENST00000556994 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
SRP54-213ENST00000556994 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
SRP54-213ENST00000556994 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
SRP54-213ENST00000556994 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
SRP54-213ENST00000556994 MDN1Q9NU22 5596 aa3.4□□□□□ -1.87
SRP54-213ENST00000556994 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
SRP54-213ENST00000556994 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
SRP54-213ENST00000556994 LCE1DQ5T752 114 aa3.33□□□□□ -1.88
SRP54-213ENST00000556994 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
SRP54-213ENST00000556994 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
SRP54-213ENST00000556994 MT1AP04731 61 aa3.28□□□□□ -1.88
SRP54-213ENST00000556994 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
SRP54-213ENST00000556994 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
SRP54-213ENST00000556994 NEBP20929 6669 aa3.21□□□□□ -1.9
SRP54-213ENST00000556994 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
SRP54-213ENST00000556994 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
SRP54-213ENST00000556994 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
SRP54-213ENST00000556994 PRM1P04553 51 aa3.17□□□□□ -1.9
SRP54-213ENST00000556994 SPRR2EP22531 72 aa3.16□□□□□ -1.9
SRP54-213ENST00000556994 SPRR2BP35325 72 aa3.16□□□□□ -1.9
SRP54-213ENST00000556994 SPRR2AP35326 72 aa3.16□□□□□ -1.9
SRP54-213ENST00000556994 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.91
SRP54-213ENST00000556994 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
SRP54-213ENST00000556994 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
SRP54-213ENST00000556994 SPRR2DP22532 72 aa3.04□□□□□ -1.92
SRP54-213ENST00000556994 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
SRP54-213ENST00000556994 KRTAP20-1Q3LI63 56 aa2.95□□□□□ -1.94
SRP54-213ENST00000556994 MT3P25713 68 aa2.91□□□□□ -1.94
SRP54-213ENST00000556994 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
SRP54-213ENST00000556994 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
SRP54-213ENST00000556994 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
SRP54-213ENST00000556994 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
SRP54-213ENST00000556994 MT4P47944 62 aa2.68□□□□□ -1.98
SRP54-213ENST00000556994 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
SRP54-213ENST00000556994 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -2
SRP54-213ENST00000556994 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
SRP54-213ENST00000556994 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
SRP54-213ENST00000556994 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
SRP54-213ENST00000556994 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
SRP54-213ENST00000556994 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
SRP54-213ENST00000556994 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
SRP54-213ENST00000556994 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.05
SRP54-213ENST00000556994 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
SRP54-213ENST00000556994 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
SRP54-213ENST00000556994 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
SRP54-213ENST00000556994 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
SRP54-213ENST00000556994 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
SRP54-213ENST00000556994 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
SRP54-213ENST00000556994 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
SRP54-213ENST00000556994 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
SRP54-213ENST00000556994 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
SRP54-213ENST00000556994 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
SRP54-213ENST00000556994 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
SRP54-213ENST00000556994 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
SRP54-213ENST00000556994 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms