RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 SPRR2EP22531 72 aa8.75□□□□□ -1.01
SIX4-203ENST00000556952 SPRR2BP35325 72 aa8.75□□□□□ -1.01
SIX4-203ENST00000556952 SPRR2AP35326 72 aa8.75□□□□□ -1.01
SIX4-203ENST00000556952 LCE1AQ5T7P2 110 aa8.7□□□□□ -1.02
SIX4-203ENST00000556952 MT1EP04732 61 aa8.67□□□□□ -1.02
SIX4-203ENST00000556952 KRTAP15-1Q3LI76 137 aa8.61□□□□□ -1.03
SIX4-203ENST00000556952 KRTAP20-1Q3LI63 56 aa8.53□□□□□ -1.04
SIX4-203ENST00000556952 MT1LQ93083 61 aa8.46□□□□□ -1.06
SIX4-203ENST00000556952 SPRR2DP22532 72 aa8.45□□□□□ -1.06
SIX4-203ENST00000556952 KRTAP2-3P0C7H8 128 aa8.39□□□□□ -1.07
SIX4-203ENST00000556952 KRTAP19-4Q3LI73 84 aa8.39□□□□□ -1.07
SIX4-203ENST00000556952 KRTAP19-3Q7Z4W3 81 aa8.39□□□□□ -1.07
SIX4-203ENST00000556952 KRTAP2-4Q9BYR9 128 aa8.39□□□□□ -1.07
SIX4-203ENST00000556952 MT1GP13640 62 aa8.31□□□□□ -1.08
SIX4-203ENST00000556952 LCE5AQ5TCM9 118 aa8.3□□□□□ -1.08
SIX4-203ENST00000556952 LCE3CQ5T5A8 94 aa8.24□□□□□ -1.09
SIX4-203ENST00000556952 LCE3BQ5TA77 95 aa8.19□□□□□ -1.1
SIX4-203ENST00000556952 MT1MQ8N339 61 aa8.18□□□□□ -1.1
SIX4-203ENST00000556952 KRTAP2-2Q9BYT5 123 aa8.15□□□□□ -1.1
SIX4-203ENST00000556952 KRTAP2-1Q9BYU5 128 aa8.15□□□□□ -1.1
SIX4-203ENST00000556952 DSTQ03001 7570 aaKnown RBP8.11□□□□□ -1.11
SIX4-203ENST00000556952 KRTAP4-7Q9BYR0 210 aa8.09□□□□□ -1.11
SIX4-203ENST00000556952 SPRR5A0A1B0GTR4 108 aa8.04□□□□□ -1.12
SIX4-203ENST00000556952 KRTAP4-3Q9BYR4 195 aa7.94□□□□□ -1.14
SIX4-203ENST00000556952 KRTAP9-6A8MVA2 160 aa7.74□□□□□ -1.17
SIX4-203ENST00000556952 LUZP6Q538Z0 58 aa7.67□□□□□ -1.18
SIX4-203ENST00000556952 LOC100996750A0A140TA64 210 aa7.62□□□□□ -1.19
SIX4-203ENST00000556952 KRTAP4-9Q9BYQ8 210 aa7.55□□□□□ -1.2
SIX4-203ENST00000556952 LCE4AQ5TA78 99 aa7.46□□□□□ -1.21
SIX4-203ENST00000556952 KRTAP5-4Q6L8H1 288 aa7.44□□□□□ -1.22
SIX4-203ENST00000556952 LCE1DQ5T752 114 aa7.42□□□□□ -1.22
SIX4-203ENST00000556952 KRTAP5-5Q701N2 237 aaPredicted RBP7.42□□□□□ -1.22
SIX4-203ENST00000556952 MT4P47944 62 aa7.38□□□□□ -1.23
SIX4-203ENST00000556952 HMCN1Q96RW7 5635 aa7.36□□□□□ -1.23
SIX4-203ENST00000556952 NDUFAF8A1L188 74 aa7.26□□□□□ -1.25
SIX4-203ENST00000556952 KRTAP4-6Q9BYQ5 205 aa7.23□□□□□ -1.25
SIX4-203ENST00000556952 MT1AP04731 61 aa7.21□□□□□ -1.25
SIX4-203ENST00000556952 GPR98Q8WXG9 6306 aa7.14□□□□□ -1.27
SIX4-203ENST00000556952 SYNE1Q8NF91 8797 aaKnown RBP7.12□□□□□ -1.27
SIX4-203ENST00000556952 KRTAP6-1Q3LI64 71 aa7.11□□□□□ -1.27
SIX4-203ENST00000556952 KRTAP20-2Q3LI61 65 aa7□□□□□ -1.29
SIX4-203ENST00000556952 KRTAP12-4P60329 112 aa6.99□□□□□ -1.29
SIX4-203ENST00000556952 AHNAK2Q8IVF2 5795 aa6.98□□□□□ -1.29
SIX4-203ENST00000556952 KRTAP9-4Q9BYQ2 154 aa6.86□□□□□ -1.31
SIX4-203ENST00000556952 KRTAP5-3Q6L8H2 238 aa6.79□□□□□ -1.32
SIX4-203ENST00000556952 KRTAP5-10Q6L8G5 202 aa6.67□□□□□ -1.34
SIX4-203ENST00000556952 H3BS24 57 aa6.63□□□□□ -1.35
SIX4-203ENST00000556952 KRTAP5-2Q701N4 177 aa6.6□□□□□ -1.35
SIX4-203ENST00000556952 KRTAP6-2Q3LI66 62 aa6.59□□□□□ -1.35
SIX4-203ENST00000556952 MT3P25713 68 aa6.55□□□□□ -1.36
SIX4-203ENST00000556952 A0A0A0MQY5 61 aa6.36□□□□□ -1.39
SIX4-203ENST00000556952 KRTAP5-7Q6L8G8 165 aa6.34□□□□□ -1.39
SIX4-203ENST00000556952 KRTAP4-11Q9BYQ6 195 aa6.27□□□□□ -1.41
SIX4-203ENST00000556952 OBSCNQ5VST9 7968 aa6.21□□□□□ -1.42
SIX4-203ENST00000556952 LCE3DQ9BYE3 92 aa6.15□□□□□ -1.42
SIX4-203ENST00000556952 KRTAP5-8O75690 187 aa6.08□□□□□ -1.44
SIX4-203ENST00000556952 INE1O15225 51 aa6.05□□□□□ -1.44
SIX4-203ENST00000556952 LCE3EQ5T5B0 92 aa5.96□□□□□ -1.46
SIX4-203ENST00000556952 KRTAP5-1Q6L8H4 278 aa5.84□□□□□ -1.47
SIX4-203ENST00000556952 MUC5ACP98088 5654 aa5.81□□□□□ -1.48
SIX4-203ENST00000556952 LCE1EQ5T753 118 aa5.76□□□□□ -1.49
SIX4-203ENST00000556952 MUC5BQ9HC84 5762 aaPredicted RBP5.68□□□□□ -1.5
SIX4-203ENST00000556952 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
SIX4-203ENST00000556952 AHNAKQ09666 5890 aaKnown RBP5.62□□□□□ -1.51
SIX4-203ENST00000556952 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.55
SIX4-203ENST00000556952 LCE1BQ5T7P3 118 aa5.38□□□□□ -1.55
SIX4-203ENST00000556952 LCE1CQ5T751 118 aa5.36□□□□□ -1.55
SIX4-203ENST00000556952 PRM1P04553 51 aa5.08□□□□□ -1.6
SIX4-203ENST00000556952 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.01□□□□□ -1.61
SIX4-203ENST00000556952 KRTAP5-11Q6L8G4 156 aa4.77□□□□□ -1.65
SIX4-203ENST00000556952 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
SIX4-203ENST00000556952 KRTAP21-2Q3LI59 83 aa4.67□□□□□ -1.66
SIX4-203ENST00000556952 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
SIX4-203ENST00000556952 KRTAP4-4Q9BYR3 166 aa4.14□□□□□ -1.75
SIX4-203ENST00000556952 PHGR1C9JFL3 82 aa4.1□□□□□ -1.75
SIX4-203ENST00000556952 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
SIX4-203ENST00000556952 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
SIX4-203ENST00000556952 MUC16Q8WXI7 14507 aa2.68□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 270 ms