RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 SPRR2DP22532 72 aa6.39□□□□□ -1.39
PSEN1-218ENST00000556864 KRTAP20-1Q3LI63 56 aa6.36□□□□□ -1.39
PSEN1-218ENST00000556864 KRTAP19-3Q7Z4W3 81 aa6.36□□□□□ -1.39
PSEN1-218ENST00000556864 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
PSEN1-218ENST00000556864 PRO0628Q9UI54 55 aa6.3□□□□□ -1.4
PSEN1-218ENST00000556864 LCE5AQ5TCM9 118 aa6.29□□□□□ -1.4
PSEN1-218ENST00000556864 KRTAP2-3P0C7H8 128 aa6.28□□□□□ -1.4
PSEN1-218ENST00000556864 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
PSEN1-218ENST00000556864 KRTAP2-4Q9BYR9 128 aa6.28□□□□□ -1.4
PSEN1-218ENST00000556864 MT1LQ93083 61 aa6.26□□□□□ -1.41
PSEN1-218ENST00000556864 MT1GP13640 62 aa6.25□□□□□ -1.41
PSEN1-218ENST00000556864 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
PSEN1-218ENST00000556864 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
PSEN1-218ENST00000556864 MT1MQ8N339 61 aa6.15□□□□□ -1.42
PSEN1-218ENST00000556864 KRTAP2-2Q9BYT5 123 aa6.1□□□□□ -1.43
PSEN1-218ENST00000556864 KRTAP2-1Q9BYU5 128 aa6.1□□□□□ -1.43
PSEN1-218ENST00000556864 PMAIP1Q13794 54 aa6.08□□□□□ -1.44
PSEN1-218ENST00000556864 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
PSEN1-218ENST00000556864 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
PSEN1-218ENST00000556864 DSTQ03001 7570 aaKnown RBP5.92□□□□□ -1.46
PSEN1-218ENST00000556864 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
PSEN1-218ENST00000556864 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
PSEN1-218ENST00000556864 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
PSEN1-218ENST00000556864 KTN1-AS1Q86SY8 53 aa5.85□□□□□ -1.47
PSEN1-218ENST00000556864 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
PSEN1-218ENST00000556864 KRTAP4-6Q9BYQ5 205 aa5.76□□□□□ -1.49
PSEN1-218ENST00000556864 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
PSEN1-218ENST00000556864 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
PSEN1-218ENST00000556864 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
PSEN1-218ENST00000556864 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
PSEN1-218ENST00000556864 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
PSEN1-218ENST00000556864 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
PSEN1-218ENST00000556864 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
PSEN1-218ENST00000556864 MT4P47944 62 aa5.52□□□□□ -1.53
PSEN1-218ENST00000556864 HMCN1Q96RW7 5635 aa5.49□□□□□ -1.53
PSEN1-218ENST00000556864 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
PSEN1-218ENST00000556864 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
PSEN1-218ENST00000556864 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
PSEN1-218ENST00000556864 MT1AP04731 61 aa5.36□□□□□ -1.55
PSEN1-218ENST00000556864 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
PSEN1-218ENST00000556864 KRTAP9-9Q9BYP9 154 aa5.31□□□□□ -1.56
PSEN1-218ENST00000556864 KRTAP20-2Q3LI61 65 aa5.28□□□□□ -1.56
PSEN1-218ENST00000556864 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
PSEN1-218ENST00000556864 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
PSEN1-218ENST00000556864 GPR98Q8WXG9 6306 aa5.24□□□□□ -1.57
PSEN1-218ENST00000556864 AHNAK2Q8IVF2 5795 aa5.17□□□□□ -1.58
PSEN1-218ENST00000556864 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
PSEN1-218ENST00000556864 KRTAP5-2Q701N4 177 aa5□□□□□ -1.61
PSEN1-218ENST00000556864 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
PSEN1-218ENST00000556864 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
PSEN1-218ENST00000556864 MT3P25713 68 aa4.89□□□□□ -1.63
PSEN1-218ENST00000556864 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
PSEN1-218ENST00000556864 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
PSEN1-218ENST00000556864 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
PSEN1-218ENST00000556864 NDUFAF8A1L188 74 aa4.65□□□□□ -1.67
PSEN1-218ENST00000556864 KRTAP5-8O75690 187 aa4.52□□□□□ -1.69
PSEN1-218ENST00000556864 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
PSEN1-218ENST00000556864 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.7
PSEN1-218ENST00000556864 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
PSEN1-218ENST00000556864 KRTAP5-1Q6L8H4 278 aa4.37□□□□□ -1.71
PSEN1-218ENST00000556864 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
PSEN1-218ENST00000556864 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
PSEN1-218ENST00000556864 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.74
PSEN1-218ENST00000556864 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
PSEN1-218ENST00000556864 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
PSEN1-218ENST00000556864 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
PSEN1-218ENST00000556864 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
PSEN1-218ENST00000556864 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
PSEN1-218ENST00000556864 INE1O15225 51 aa3.8□□□□□ -1.8
PSEN1-218ENST00000556864 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
PSEN1-218ENST00000556864 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
PSEN1-218ENST00000556864 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
PSEN1-218ENST00000556864 PRM1P04553 51 aa3.33□□□□□ -1.88
PSEN1-218ENST00000556864 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
PSEN1-218ENST00000556864 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
PSEN1-218ENST00000556864 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
PSEN1-218ENST00000556864 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
PSEN1-218ENST00000556864 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 83.5 ms