RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
CHD8-211ENST00000556833 TNP1P09430 55 aa4.98□□□□□ -1.61
CHD8-211ENST00000556833 SMIM26A0A096LP01 95 aa4.95□□□□□ -1.62
CHD8-211ENST00000556833 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
CHD8-211ENST00000556833 A0A1B0GU69 56 aa4.91□□□□□ -1.62
CHD8-211ENST00000556833 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
CHD8-211ENST00000556833 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
CHD8-211ENST00000556833 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
CHD8-211ENST00000556833 H7BZZ5 65 aa4.82□□□□□ -1.64
CHD8-211ENST00000556833 LOC100996750A0A140TA64 210 aa4.81□□□□□ -1.64
CHD8-211ENST00000556833 COX7CP15954 63 aa4.8□□□□□ -1.64
CHD8-211ENST00000556833 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
CHD8-211ENST00000556833 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
CHD8-211ENST00000556833 PRR15LQ9BU68 103 aa4.63□□□□□ -1.67
CHD8-211ENST00000556833 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
CHD8-211ENST00000556833 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
CHD8-211ENST00000556833 LINC01558Q9Y6Z2 57 aa4.51□□□□□ -1.69
CHD8-211ENST00000556833 ANAPC13Q9BS18 74 aa4.5□□□□□ -1.69
CHD8-211ENST00000556833 CCDC179H3BU77 68 aa4.47□□□□□ -1.69
CHD8-211ENST00000556833 UQCR11O14957 56 aa4.47□□□□□ -1.69
CHD8-211ENST00000556833 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
CHD8-211ENST00000556833 KRTAP5-2Q701N4 177 aa4.46□□□□□ -1.7
CHD8-211ENST00000556833 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
CHD8-211ENST00000556833 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
CHD8-211ENST00000556833 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
CHD8-211ENST00000556833 MT1AP04731 61 aa4.42□□□□□ -1.7
CHD8-211ENST00000556833 ATP5EP56381 51 aaPredicted RBP4.39□□□□□ -1.71
CHD8-211ENST00000556833 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
CHD8-211ENST00000556833 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
CHD8-211ENST00000556833 MIR22HGQ0VDD5 57 aa4.38□□□□□ -1.71
CHD8-211ENST00000556833 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
CHD8-211ENST00000556833 MUC5BQ9HC84 5762 aaPredicted RBP4.34□□□□□ -1.71
CHD8-211ENST00000556833 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.72
CHD8-211ENST00000556833 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
CHD8-211ENST00000556833 K7ERS5 55 aa4.31□□□□□ -1.72
CHD8-211ENST00000556833 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
CHD8-211ENST00000556833 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
CHD8-211ENST00000556833 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
CHD8-211ENST00000556833 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
CHD8-211ENST00000556833 PSPHP1O15172 72 aa4.19□□□□□ -1.74
CHD8-211ENST00000556833 TMEM258P61165 79 aa4.18□□□□□ -1.74
CHD8-211ENST00000556833 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
CHD8-211ENST00000556833 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
CHD8-211ENST00000556833 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
CHD8-211ENST00000556833 MT3P25713 68 aa4.04□□□□□ -1.76
CHD8-211ENST00000556833 Q1T7F1 81 aa4.03□□□□□ -1.76
CHD8-211ENST00000556833 A6NED7 52 aa3.99□□□□□ -1.77
CHD8-211ENST00000556833 V9GYY9 64 aa3.99□□□□□ -1.77
CHD8-211ENST00000556833 ROMO1P60602 79 aa3.98□□□□□ -1.77
CHD8-211ENST00000556833 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
CHD8-211ENST00000556833 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
CHD8-211ENST00000556833 H3BS24 57 aa3.63□□□□□ -1.83
CHD8-211ENST00000556833 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
CHD8-211ENST00000556833 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
CHD8-211ENST00000556833 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
CHD8-211ENST00000556833 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
CHD8-211ENST00000556833 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
CHD8-211ENST00000556833 PCP4P48539 62 aa3.11□□□□□ -1.91
CHD8-211ENST00000556833 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
CHD8-211ENST00000556833 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
CHD8-211ENST00000556833 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
CHD8-211ENST00000556833 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
CHD8-211ENST00000556833 PRAC1Q96KF2 57 aa2.92□□□□□ -1.94
CHD8-211ENST00000556833 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
CHD8-211ENST00000556833 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
CHD8-211ENST00000556833 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
CHD8-211ENST00000556833 PMAIP1Q13794 54 aa2.81□□□□□ -1.96
CHD8-211ENST00000556833 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
CHD8-211ENST00000556833 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
CHD8-211ENST00000556833 SVIPQ8NHG7 77 aa2.35□□□□□ -2.03
CHD8-211ENST00000556833 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
CHD8-211ENST00000556833 A0A0A0MQY5 61 aa2.27□□□□□ -2.05
CHD8-211ENST00000556833 KTN1-AS1Q86SY8 53 aa2.25□□□□□ -2.05
CHD8-211ENST00000556833 PRO0628Q9UI54 55 aa2.21□□□□□ -2.06
CHD8-211ENST00000556833 PRM1P04553 51 aa2.07□□□□□ -2.08
CHD8-211ENST00000556833 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
CHD8-211ENST00000556833 NDUFAF8A1L188 74 aa1.85□□□□□ -2.11
CHD8-211ENST00000556833 INE1O15225 51 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 72.5 ms