RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 TLN1Q9Y490 2541 aaKnown RBP0.59□□□□□ -2.31
KTN1-224ENST00000556631 SMR3AQ99954 134 aa0.59□□□□□ -2.31
KTN1-224ENST00000556631 COL6A5A8TX70 2615 aa0.59□□□□□ -2.31
KTN1-224ENST00000556631 STAB2Q8WWQ8 2551 aa0.59□□□□□ -2.32
KTN1-224ENST00000556631 RNF213Q63HN8 5207 aa0.59□□□□□ -2.32
KTN1-224ENST00000556631 LPAP08519 4548 aa0.58□□□□□ -2.32
KTN1-224ENST00000556631 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
KTN1-224ENST00000556631 DSTQ03001 7570 aaKnown RBP0.58□□□□□ -2.32
KTN1-224ENST00000556631 IGSF10Q6WRI0 2623 aa0.57□□□□□ -2.32
KTN1-224ENST00000556631 USP24Q9UPU5 2620 aa0.57□□□□□ -2.32
KTN1-224ENST00000556631 KRTAP20-1Q3LI63 56 aa0.57□□□□□ -2.32
KTN1-224ENST00000556631 KRTAP2-1Q9BYU5 128 aa0.57□□□□□ -2.32
KTN1-224ENST00000556631 MUC17Q685J3 4493 aa0.57□□□□□ -2.32
KTN1-224ENST00000556631 CEP295Q9C0D2 2601 aa0.56□□□□□ -2.32
KTN1-224ENST00000556631 SMR3BP02814 79 aaPredicted RBP0.56□□□□□ -2.32
KTN1-224ENST00000556631 PRM1P04553 51 aa0.55□□□□□ -2.32
KTN1-224ENST00000556631 KRTAP19-6Q3LI70 58 aa0.55□□□□□ -2.32
KTN1-224ENST00000556631 CENPEQ02224 2701 aa0.55□□□□□ -2.32
KTN1-224ENST00000556631 TENM1Q9UKZ4 2725 aa0.55□□□□□ -2.32
KTN1-224ENST00000556631 SPRR2BP35325 72 aa0.55□□□□□ -2.32
KTN1-224ENST00000556631 KRTAP5-10Q6L8G5 202 aa0.55□□□□□ -2.32
KTN1-224ENST00000556631 KRTAP8-1Q8IUC2 63 aa0.55□□□□□ -2.32
KTN1-224ENST00000556631 TEX15Q9BXT5 2789 aa0.55□□□□□ -2.32
KTN1-224ENST00000556631 KRTAP9-6A8MVA2 160 aa0.54□□□□□ -2.32
KTN1-224ENST00000556631 FLNBO75369 2602 aaKnown RBP0.54□□□□□ -2.32
KTN1-224ENST00000556631 UNC79Q9P2D8 2635 aa0.54□□□□□ -2.32
KTN1-224ENST00000556631 NSD1Q96L73 2696 aaPredicted RBP0.53□□□□□ -2.32
KTN1-224ENST00000556631 TENM3Q9P273 2699 aa0.53□□□□□ -2.32
KTN1-224ENST00000556631 SPRR2AP35326 72 aa0.53□□□□□ -2.32
KTN1-224ENST00000556631 TEP1Q99973 2627 aaKnown RBP0.52□□□□□ -2.33
KTN1-224ENST00000556631 SPRR2DP22532 72 aa0.52□□□□□ -2.33
KTN1-224ENST00000556631 NBEAL1Q6ZS30 2694 aa0.51□□□□□ -2.33
KTN1-224ENST00000556631 GCN1Q92616 2671 aaKnown RBP0.51□□□□□ -2.33
KTN1-224ENST00000556631 KMT2DO14686 5537 aa0.5□□□□□ -2.33
KTN1-224ENST00000556631 FSIP2Q5CZC0 6907 aa0.5□□□□□ -2.33
KTN1-224ENST00000556631 TGP01266 2768 aa0.5□□□□□ -2.33
KTN1-224ENST00000556631 FLNAP21333 2647 aaKnown RBP0.5□□□□□ -2.33
KTN1-224ENST00000556631 SPRR2GQ9BYE4 73 aa0.49□□□□□ -2.33
KTN1-224ENST00000556631 USH2AO75445 5202 aa0.49□□□□□ -2.33
KTN1-224ENST00000556631 SETXQ7Z333 2677 aaKnown RBP0.49□□□□□ -2.33
KTN1-224ENST00000556631 FCGBPQ9Y6R7 5405 aaPredicted RBP0.48□□□□□ -2.33
KTN1-224ENST00000556631 ITPR2Q14571 2701 aa0.46□□□□□ -2.34
KTN1-224ENST00000556631 SRRM2Q9UQ35 2752 aaKnown RBP0.46□□□□□ -2.34
KTN1-224ENST00000556631 SPRR2FQ96RM1 72 aa0.46□□□□□ -2.34
KTN1-224ENST00000556631 FLNCQ14315 2725 aa0.46□□□□□ -2.34
KTN1-224ENST00000556631 NBEAL2Q6ZNJ1 2754 aa0.46□□□□□ -2.34
KTN1-224ENST00000556631 MT1AP04731 61 aa0.45□□□□□ -2.34
KTN1-224ENST00000556631 SPRR2EP22531 72 aa0.45□□□□□ -2.34
KTN1-224ENST00000556631 MT1HL1P0DM35 61 aa0.45□□□□□ -2.34
KTN1-224ENST00000556631 ANKRD11Q6UB99 2663 aaPredicted RBP0.45□□□□□ -2.34
KTN1-224ENST00000556631 KRTAP19-3Q7Z4W3 81 aa0.44□□□□□ -2.34
KTN1-224ENST00000556631 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
KTN1-224ENST00000556631 HIVEP1P15822 2718 aa0.44□□□□□ -2.34
KTN1-224ENST00000556631 LCE1CQ5T751 118 aa0.43□□□□□ -2.34
KTN1-224ENST00000556631 LCE1BQ5T7P3 118 aa0.43□□□□□ -2.34
KTN1-224ENST00000556631 MT1HP80294 61 aa0.43□□□□□ -2.34
KTN1-224ENST00000556631 KRTAP19-5Q3LI72 72 aa0.42□□□□□ -2.34
KTN1-224ENST00000556631 ITPR3Q14573 2671 aa0.42□□□□□ -2.34
KTN1-224ENST00000556631 MT1LQ93083 61 aa0.42□□□□□ -2.34
KTN1-224ENST00000556631 MUC12Q9UKN1 5478 aa0.41□□□□□ -2.34
KTN1-224ENST00000556631 KRTAP6-2Q3LI66 62 aa0.41□□□□□ -2.34
KTN1-224ENST00000556631 MT1EP04732 61 aa0.4□□□□□ -2.35
KTN1-224ENST00000556631 KRTAP19-2Q3LHN2 52 aa0.39□□□□□ -2.35
KTN1-224ENST00000556631 KRTAP19-8Q3LI54 63 aa0.39□□□□□ -2.35
KTN1-224ENST00000556631 MT1GP13640 62 aa0.39□□□□□ -2.35
KTN1-224ENST00000556631 KRTAP21-2Q3LI59 83 aa0.38□□□□□ -2.35
KTN1-224ENST00000556631 MT1XP80297 61 aa0.37□□□□□ -2.35
KTN1-224ENST00000556631 MT1FP04733 61 aa0.36□□□□□ -2.35
KTN1-224ENST00000556631 MT2AP02795 61 aa0.36□□□□□ -2.35
KTN1-224ENST00000556631 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.35
KTN1-224ENST00000556631 KRTAP19-7Q3SYF9 63 aa0.34□□□□□ -2.35
KTN1-224ENST00000556631 MT1MQ8N339 61 aa0.32□□□□□ -2.36
KTN1-224ENST00000556631 KRTAP4-1Q9BYQ7 146 aa0.29□□□□□ -2.36
KTN1-224ENST00000556631 MT1BP07438 61 aa0.29□□□□□ -2.36
KTN1-224ENST00000556631 KRTAP20-2Q3LI61 65 aa0.29□□□□□ -2.36
KTN1-224ENST00000556631 KRTAP6-1Q3LI64 71 aa0.27□□□□□ -2.37
KTN1-224ENST00000556631 MT4P47944 62 aa0.24□□□□□ -2.37
KTN1-224ENST00000556631 PHGR1C9JFL3 82 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 48.2 ms