RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 MUC12Q9UKN1 5478 aa6.45□□□□□ -1.38
SDR39U1-220ENST00000556548 CRCT1Q9UGL9 99 aa6.44□□□□□ -1.38
SDR39U1-220ENST00000556548 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
SDR39U1-220ENST00000556548 SPRR2FQ96RM1 72 aa6.32□□□□□ -1.4
SDR39U1-220ENST00000556548 KRTAP9-6A8MVA2 160 aa6.27□□□□□ -1.41
SDR39U1-220ENST00000556548 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
SDR39U1-220ENST00000556548 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
SDR39U1-220ENST00000556548 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.41
SDR39U1-220ENST00000556548 MT1GP13640 62 aa6.17□□□□□ -1.42
SDR39U1-220ENST00000556548 MT1MQ8N339 61 aa6.16□□□□□ -1.42
SDR39U1-220ENST00000556548 MDN1Q9NU22 5596 aa6.13□□□□□ -1.43
SDR39U1-220ENST00000556548 LCE5AQ5TCM9 118 aa6.09□□□□□ -1.43
SDR39U1-220ENST00000556548 DSTQ03001 7570 aaKnown RBP6.06□□□□□ -1.44
SDR39U1-220ENST00000556548 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
SDR39U1-220ENST00000556548 KRTAP5-9P26371 169 aa6.03□□□□□ -1.44
SDR39U1-220ENST00000556548 KRTAP9-6A0A140TA67 174 aa5.98□□□□□ -1.45
SDR39U1-220ENST00000556548 LCE1AQ5T7P2 110 aa5.96□□□□□ -1.46
SDR39U1-220ENST00000556548 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
SDR39U1-220ENST00000556548 SPRR2EP22531 72 aa5.91□□□□□ -1.46
SDR39U1-220ENST00000556548 SPRR2BP35325 72 aa5.91□□□□□ -1.46
SDR39U1-220ENST00000556548 SPRR2AP35326 72 aa5.91□□□□□ -1.46
SDR39U1-220ENST00000556548 KRTAP2-3P0C7H8 128 aa5.84□□□□□ -1.47
SDR39U1-220ENST00000556548 KRTAP2-4Q9BYR9 128 aa5.84□□□□□ -1.47
SDR39U1-220ENST00000556548 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
SDR39U1-220ENST00000556548 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
SDR39U1-220ENST00000556548 SPRR2DP22532 72 aa5.67□□□□□ -1.5
SDR39U1-220ENST00000556548 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
SDR39U1-220ENST00000556548 KRTAP6-1Q3LI64 71 aa5.5□□□□□ -1.53
SDR39U1-220ENST00000556548 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
SDR39U1-220ENST00000556548 NEBP20929 6669 aa5.45□□□□□ -1.54
SDR39U1-220ENST00000556548 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
SDR39U1-220ENST00000556548 MT1AP04731 61 aa5.43□□□□□ -1.54
SDR39U1-220ENST00000556548 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
SDR39U1-220ENST00000556548 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
SDR39U1-220ENST00000556548 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
SDR39U1-220ENST00000556548 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
SDR39U1-220ENST00000556548 KRTAP5-4Q6L8H1 288 aa5.08□□□□□ -1.6
SDR39U1-220ENST00000556548 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
SDR39U1-220ENST00000556548 MT4P47944 62 aa5.01□□□□□ -1.61
SDR39U1-220ENST00000556548 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
SDR39U1-220ENST00000556548 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
SDR39U1-220ENST00000556548 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
SDR39U1-220ENST00000556548 MT3P25713 68 aa4.92□□□□□ -1.62
SDR39U1-220ENST00000556548 LCE4AQ5TA78 99 aa4.91□□□□□ -1.62
SDR39U1-220ENST00000556548 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.62
SDR39U1-220ENST00000556548 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.63
SDR39U1-220ENST00000556548 HMCN1Q96RW7 5635 aa4.85□□□□□ -1.63
SDR39U1-220ENST00000556548 LCE3EQ5T5B0 92 aa4.82□□□□□ -1.64
SDR39U1-220ENST00000556548 KRTAP20-2Q3LI61 65 aa4.81□□□□□ -1.64
SDR39U1-220ENST00000556548 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
SDR39U1-220ENST00000556548 PRM1P04553 51 aa4.78□□□□□ -1.64
SDR39U1-220ENST00000556548 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.66
SDR39U1-220ENST00000556548 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
SDR39U1-220ENST00000556548 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
SDR39U1-220ENST00000556548 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
SDR39U1-220ENST00000556548 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
SDR39U1-220ENST00000556548 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
SDR39U1-220ENST00000556548 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
SDR39U1-220ENST00000556548 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
SDR39U1-220ENST00000556548 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
SDR39U1-220ENST00000556548 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
SDR39U1-220ENST00000556548 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
SDR39U1-220ENST00000556548 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
SDR39U1-220ENST00000556548 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
SDR39U1-220ENST00000556548 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
SDR39U1-220ENST00000556548 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.84
SDR39U1-220ENST00000556548 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
SDR39U1-220ENST00000556548 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
SDR39U1-220ENST00000556548 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
SDR39U1-220ENST00000556548 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
SDR39U1-220ENST00000556548 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
SDR39U1-220ENST00000556548 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
SDR39U1-220ENST00000556548 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
SDR39U1-220ENST00000556548 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
SDR39U1-220ENST00000556548 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
SDR39U1-220ENST00000556548 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
SDR39U1-220ENST00000556548 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
SDR39U1-220ENST00000556548 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms