RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 MT1GP13640 62 aa4.15□□□□□ -1.75
SLIRP-206ENST00000556375 Q1T7F1 81 aa4.14□□□□□ -1.75
SLIRP-206ENST00000556375 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
SLIRP-206ENST00000556375 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
SLIRP-206ENST00000556375 PSPHP1O15172 72 aa4.12□□□□□ -1.75
SLIRP-206ENST00000556375 MT1LQ93083 61 aa4.12□□□□□ -1.75
SLIRP-206ENST00000556375 K7ERS5 55 aa4.09□□□□□ -1.75
SLIRP-206ENST00000556375 MT1MQ8N339 61 aa4.09□□□□□ -1.75
SLIRP-206ENST00000556375 KRTAP25-1Q3LHN0 102 aa4.04□□□□□ -1.76
SLIRP-206ENST00000556375 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
SLIRP-206ENST00000556375 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
SLIRP-206ENST00000556375 A6NED7 52 aa4□□□□□ -1.77
SLIRP-206ENST00000556375 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
SLIRP-206ENST00000556375 KRTAP4-9Q9BYQ8 210 aa3.93□□□□□ -1.78
SLIRP-206ENST00000556375 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
SLIRP-206ENST00000556375 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
SLIRP-206ENST00000556375 KRTAP23-1A1A580 65 aa3.9□□□□□ -1.79
SLIRP-206ENST00000556375 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
SLIRP-206ENST00000556375 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
SLIRP-206ENST00000556375 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
SLIRP-206ENST00000556375 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
SLIRP-206ENST00000556375 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
SLIRP-206ENST00000556375 MT4P47944 62 aa3.83□□□□□ -1.8
SLIRP-206ENST00000556375 ROMO1P60602 79 aa3.82□□□□□ -1.8
SLIRP-206ENST00000556375 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
SLIRP-206ENST00000556375 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
SLIRP-206ENST00000556375 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
SLIRP-206ENST00000556375 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
SLIRP-206ENST00000556375 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
SLIRP-206ENST00000556375 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
SLIRP-206ENST00000556375 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
SLIRP-206ENST00000556375 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
SLIRP-206ENST00000556375 H3BS24 57 aa3.69□□□□□ -1.82
SLIRP-206ENST00000556375 LOC100996750A0A140TA64 210 aa3.68□□□□□ -1.82
SLIRP-206ENST00000556375 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
SLIRP-206ENST00000556375 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
SLIRP-206ENST00000556375 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
SLIRP-206ENST00000556375 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
SLIRP-206ENST00000556375 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
SLIRP-206ENST00000556375 MT1AP04731 61 aa3.51□□□□□ -1.85
SLIRP-206ENST00000556375 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
SLIRP-206ENST00000556375 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
SLIRP-206ENST00000556375 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
SLIRP-206ENST00000556375 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
SLIRP-206ENST00000556375 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
SLIRP-206ENST00000556375 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
SLIRP-206ENST00000556375 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
SLIRP-206ENST00000556375 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
SLIRP-206ENST00000556375 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
SLIRP-206ENST00000556375 MT3P25713 68 aa3.2□□□□□ -1.9
SLIRP-206ENST00000556375 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
SLIRP-206ENST00000556375 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
SLIRP-206ENST00000556375 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
SLIRP-206ENST00000556375 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
SLIRP-206ENST00000556375 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
SLIRP-206ENST00000556375 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
SLIRP-206ENST00000556375 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
SLIRP-206ENST00000556375 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
SLIRP-206ENST00000556375 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
SLIRP-206ENST00000556375 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
SLIRP-206ENST00000556375 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
SLIRP-206ENST00000556375 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
SLIRP-206ENST00000556375 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
SLIRP-206ENST00000556375 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
SLIRP-206ENST00000556375 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
SLIRP-206ENST00000556375 INE1O15225 51 aa2.66□□□□□ -1.98
SLIRP-206ENST00000556375 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
SLIRP-206ENST00000556375 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
SLIRP-206ENST00000556375 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
SLIRP-206ENST00000556375 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
SLIRP-206ENST00000556375 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
SLIRP-206ENST00000556375 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
SLIRP-206ENST00000556375 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
SLIRP-206ENST00000556375 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
SLIRP-206ENST00000556375 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
SLIRP-206ENST00000556375 PRM1P04553 51 aa1.95□□□□□ -2.1
SLIRP-206ENST00000556375 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
SLIRP-206ENST00000556375 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 23.9 ms