RNA–Protein interactions for RNA: ENST00000556330.5

SRSF5-213, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-213ENST00000556330 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
SRSF5-213ENST00000556330 USH2AO75445 5202 aa3.82□□□□□ -1.8
SRSF5-213ENST00000556330 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
SRSF5-213ENST00000556330 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
SRSF5-213ENST00000556330 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
SRSF5-213ENST00000556330 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
SRSF5-213ENST00000556330 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
SRSF5-213ENST00000556330 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
SRSF5-213ENST00000556330 SSPOA2VEC9 5147 aa3.71□□□□□ -1.82
SRSF5-213ENST00000556330 CRCT1Q9UGL9 99 aa3.66□□□□□ -1.82
SRSF5-213ENST00000556330 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
SRSF5-213ENST00000556330 FSIP2Q5CZC0 6907 aa3.62□□□□□ -1.83
SRSF5-213ENST00000556330 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
SRSF5-213ENST00000556330 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
SRSF5-213ENST00000556330 KRTAP19-5Q3LI72 72 aa3.55□□□□□ -1.84
SRSF5-213ENST00000556330 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
SRSF5-213ENST00000556330 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
SRSF5-213ENST00000556330 MT1EP04732 61 aa3.47□□□□□ -1.85
SRSF5-213ENST00000556330 KMT2DO14686 5537 aa3.45□□□□□ -1.86
SRSF5-213ENST00000556330 MACF1Q9UPN3 7388 aaKnown RBP3.42□□□□□ -1.86
SRSF5-213ENST00000556330 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
SRSF5-213ENST00000556330 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
SRSF5-213ENST00000556330 KRTAP5-9P26371 169 aa3.4□□□□□ -1.87
SRSF5-213ENST00000556330 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
SRSF5-213ENST00000556330 MT1LQ93083 61 aa3.39□□□□□ -1.87
SRSF5-213ENST00000556330 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
SRSF5-213ENST00000556330 MT1GP13640 62 aa3.36□□□□□ -1.87
SRSF5-213ENST00000556330 KRTAP19-3Q7Z4W3 81 aa3.36□□□□□ -1.87
SRSF5-213ENST00000556330 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
SRSF5-213ENST00000556330 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
SRSF5-213ENST00000556330 MT1MQ8N339 61 aa3.25□□□□□ -1.89
SRSF5-213ENST00000556330 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
SRSF5-213ENST00000556330 SPRR2EP22531 72 aa3.23□□□□□ -1.89
SRSF5-213ENST00000556330 SPRR2BP35325 72 aa3.23□□□□□ -1.89
SRSF5-213ENST00000556330 SPRR2AP35326 72 aa3.23□□□□□ -1.89
SRSF5-213ENST00000556330 MUC12Q9UKN1 5478 aa3.2□□□□□ -1.9
SRSF5-213ENST00000556330 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
SRSF5-213ENST00000556330 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
SRSF5-213ENST00000556330 SPRR2DP22532 72 aa3.12□□□□□ -1.91
SRSF5-213ENST00000556330 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
SRSF5-213ENST00000556330 NEBP20929 6669 aa3.01□□□□□ -1.93
SRSF5-213ENST00000556330 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
SRSF5-213ENST00000556330 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
SRSF5-213ENST00000556330 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
SRSF5-213ENST00000556330 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
SRSF5-213ENST00000556330 KRTAP2-1Q9BYU5 128 aa2.95□□□□□ -1.94
SRSF5-213ENST00000556330 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
SRSF5-213ENST00000556330 MT1AP04731 61 aa2.92□□□□□ -1.94
SRSF5-213ENST00000556330 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
SRSF5-213ENST00000556330 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
SRSF5-213ENST00000556330 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
SRSF5-213ENST00000556330 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
SRSF5-213ENST00000556330 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
SRSF5-213ENST00000556330 INE1O15225 51 aa2.77□□□□□ -1.97
SRSF5-213ENST00000556330 MT4P47944 62 aa2.65□□□□□ -1.99
SRSF5-213ENST00000556330 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
SRSF5-213ENST00000556330 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
SRSF5-213ENST00000556330 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
SRSF5-213ENST00000556330 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
SRSF5-213ENST00000556330 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
SRSF5-213ENST00000556330 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
SRSF5-213ENST00000556330 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
SRSF5-213ENST00000556330 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
SRSF5-213ENST00000556330 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
SRSF5-213ENST00000556330 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
SRSF5-213ENST00000556330 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
SRSF5-213ENST00000556330 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
SRSF5-213ENST00000556330 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
SRSF5-213ENST00000556330 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
SRSF5-213ENST00000556330 PRM1P04553 51 aa2.12□□□□□ -2.07
SRSF5-213ENST00000556330 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
SRSF5-213ENST00000556330 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
SRSF5-213ENST00000556330 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
SRSF5-213ENST00000556330 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
SRSF5-213ENST00000556330 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
SRSF5-213ENST00000556330 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
SRSF5-213ENST00000556330 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
SRSF5-213ENST00000556330 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 21.9 ms