RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 MT1GP13640 62 aa4.6□□□□□ -1.67
SNX6-207ENST00000556303 ANAPC13Q9BS18 74 aa4.6□□□□□ -1.67
SNX6-207ENST00000556303 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
SNX6-207ENST00000556303 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
SNX6-207ENST00000556303 ATP5EP56381 51 aaPredicted RBP4.55□□□□□ -1.68
SNX6-207ENST00000556303 PRR15LQ9BU68 103 aa4.55□□□□□ -1.68
SNX6-207ENST00000556303 A8MU10 97 aa4.54□□□□□ -1.68
SNX6-207ENST00000556303 TNP1P09430 55 aa4.53□□□□□ -1.68
SNX6-207ENST00000556303 CCDC179H3BU77 68 aa4.48□□□□□ -1.69
SNX6-207ENST00000556303 MT1LQ93083 61 aa4.48□□□□□ -1.69
SNX6-207ENST00000556303 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
SNX6-207ENST00000556303 MT1MQ8N339 61 aa4.47□□□□□ -1.69
SNX6-207ENST00000556303 LINC01558Q9Y6Z2 57 aa4.47□□□□□ -1.69
SNX6-207ENST00000556303 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
SNX6-207ENST00000556303 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
SNX6-207ENST00000556303 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
SNX6-207ENST00000556303 UQCR11O14957 56 aa4.39□□□□□ -1.71
SNX6-207ENST00000556303 TMEM258P61165 79 aa4.38□□□□□ -1.71
SNX6-207ENST00000556303 PCP4P48539 62 aa4.34□□□□□ -1.71
SNX6-207ENST00000556303 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
SNX6-207ENST00000556303 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
SNX6-207ENST00000556303 MT4P47944 62 aa4.3□□□□□ -1.72
SNX6-207ENST00000556303 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
SNX6-207ENST00000556303 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
SNX6-207ENST00000556303 MIR22HGQ0VDD5 57 aa4.25□□□□□ -1.73
SNX6-207ENST00000556303 K7ERS5 55 aa4.24□□□□□ -1.73
SNX6-207ENST00000556303 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
SNX6-207ENST00000556303 V9GYY9 64 aa4.21□□□□□ -1.74
SNX6-207ENST00000556303 Q1T7F1 81 aa4.14□□□□□ -1.75
SNX6-207ENST00000556303 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
SNX6-207ENST00000556303 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
SNX6-207ENST00000556303 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
SNX6-207ENST00000556303 PSPHP1O15172 72 aa4.09□□□□□ -1.75
SNX6-207ENST00000556303 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
SNX6-207ENST00000556303 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
SNX6-207ENST00000556303 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
SNX6-207ENST00000556303 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
SNX6-207ENST00000556303 A6NED7 52 aa3.98□□□□□ -1.77
SNX6-207ENST00000556303 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
SNX6-207ENST00000556303 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
SNX6-207ENST00000556303 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
SNX6-207ENST00000556303 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
SNX6-207ENST00000556303 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
SNX6-207ENST00000556303 ROMO1P60602 79 aa3.89□□□□□ -1.79
SNX6-207ENST00000556303 RPS28P62857 69 aaKnown RBP3.89□□□□□ -1.79
SNX6-207ENST00000556303 MT1AP04731 61 aa3.83□□□□□ -1.8
SNX6-207ENST00000556303 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
SNX6-207ENST00000556303 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
SNX6-207ENST00000556303 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
SNX6-207ENST00000556303 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
SNX6-207ENST00000556303 MT3P25713 68 aa3.62□□□□□ -1.83
SNX6-207ENST00000556303 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
SNX6-207ENST00000556303 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
SNX6-207ENST00000556303 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
SNX6-207ENST00000556303 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
SNX6-207ENST00000556303 AHNAKQ09666 5890 aaKnown RBP3.48□□□□□ -1.85
SNX6-207ENST00000556303 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
SNX6-207ENST00000556303 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
SNX6-207ENST00000556303 PRAC1Q96KF2 57 aa3.4□□□□□ -1.87
SNX6-207ENST00000556303 BRK1Q8WUW1 75 aa3.31□□□□□ -1.88
SNX6-207ENST00000556303 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
SNX6-207ENST00000556303 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
SNX6-207ENST00000556303 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
SNX6-207ENST00000556303 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
SNX6-207ENST00000556303 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
SNX6-207ENST00000556303 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
SNX6-207ENST00000556303 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
SNX6-207ENST00000556303 PRO0628Q9UI54 55 aa2.84□□□□□ -1.95
SNX6-207ENST00000556303 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
SNX6-207ENST00000556303 KTN1-AS1Q86SY8 53 aa2.73□□□□□ -1.97
SNX6-207ENST00000556303 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
SNX6-207ENST00000556303 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
SNX6-207ENST00000556303 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
SNX6-207ENST00000556303 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
SNX6-207ENST00000556303 PRM1P04553 51 aa1.95□□□□□ -2.1
SNX6-207ENST00000556303 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
SNX6-207ENST00000556303 INE1O15225 51 aa1.61□□□□□ -2.15
SNX6-207ENST00000556303 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 8.9 ms