RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
ATXN3-235ENST00000556082 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
ATXN3-235ENST00000556082 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
ATXN3-235ENST00000556082 C10orf95Q9H7T3 257 aa3.59□□□□□ -1.83
ATXN3-235ENST00000556082 KRTAP19-8Q3LI54 63 aa3.57□□□□□ -1.84
ATXN3-235ENST00000556082 PLAC4Q8WY50 150 aa3.56□□□□□ -1.84
ATXN3-235ENST00000556082 MT1BP07438 61 aa3.48□□□□□ -1.85
ATXN3-235ENST00000556082 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
ATXN3-235ENST00000556082 TNP1P09430 55 aa3.47□□□□□ -1.85
ATXN3-235ENST00000556082 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
ATXN3-235ENST00000556082 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
ATXN3-235ENST00000556082 MT1XP80297 61 aa3.4□□□□□ -1.87
ATXN3-235ENST00000556082 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
ATXN3-235ENST00000556082 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
ATXN3-235ENST00000556082 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
ATXN3-235ENST00000556082 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
ATXN3-235ENST00000556082 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
ATXN3-235ENST00000556082 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
ATXN3-235ENST00000556082 USH2AO75445 5202 aa3.19□□□□□ -1.9
ATXN3-235ENST00000556082 KRTAP12-3P60328 96 aa3.16□□□□□ -1.9
ATXN3-235ENST00000556082 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
ATXN3-235ENST00000556082 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
ATXN3-235ENST00000556082 SSPOA2VEC9 5147 aa3.09□□□□□ -1.91
ATXN3-235ENST00000556082 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.91
ATXN3-235ENST00000556082 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-235ENST00000556082 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
ATXN3-235ENST00000556082 KRTAP19-7Q3SYF9 63 aa3.03□□□□□ -1.92
ATXN3-235ENST00000556082 MT1EP04732 61 aa2.98□□□□□ -1.93
ATXN3-235ENST00000556082 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
ATXN3-235ENST00000556082 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
ATXN3-235ENST00000556082 FCGBPQ9Y6R7 5405 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-235ENST00000556082 MT1LQ93083 61 aa2.93□□□□□ -1.94
ATXN3-235ENST00000556082 FSIP2Q5CZC0 6907 aa2.92□□□□□ -1.94
ATXN3-235ENST00000556082 CRCT1Q9UGL9 99 aa2.9□□□□□ -1.95
ATXN3-235ENST00000556082 KMT2DO14686 5537 aa2.9□□□□□ -1.95
ATXN3-235ENST00000556082 MT1GP13640 62 aa2.84□□□□□ -1.95
ATXN3-235ENST00000556082 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
ATXN3-235ENST00000556082 SPRR2FQ96RM1 72 aa2.79□□□□□ -1.96
ATXN3-235ENST00000556082 MT1MQ8N339 61 aa2.78□□□□□ -1.96
ATXN3-235ENST00000556082 MACF1Q9UPN3 7388 aaKnown RBP2.74□□□□□ -1.97
ATXN3-235ENST00000556082 KRTAP6-3Q3LI67 103 aa2.69□□□□□ -1.98
ATXN3-235ENST00000556082 KRTAP2-3P0C7H8 128 aa2.68□□□□□ -1.98
ATXN3-235ENST00000556082 KRTAP2-4Q9BYR9 128 aa2.68□□□□□ -1.98
ATXN3-235ENST00000556082 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
ATXN3-235ENST00000556082 MUC12Q9UKN1 5478 aa2.68□□□□□ -1.98
ATXN3-235ENST00000556082 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
ATXN3-235ENST00000556082 SPRR2EP22531 72 aa2.62□□□□□ -1.99
ATXN3-235ENST00000556082 SPRR2BP35325 72 aa2.62□□□□□ -1.99
ATXN3-235ENST00000556082 SPRR2AP35326 72 aa2.62□□□□□ -1.99
ATXN3-235ENST00000556082 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
ATXN3-235ENST00000556082 INE1O15225 51 aa2.56□□□□□ -2
ATXN3-235ENST00000556082 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
ATXN3-235ENST00000556082 SPRR2DP22532 72 aa2.53□□□□□ -2
ATXN3-235ENST00000556082 MDN1Q9NU22 5596 aa2.53□□□□□ -2
ATXN3-235ENST00000556082 MT1AP04731 61 aa2.5□□□□□ -2.01
ATXN3-235ENST00000556082 DSTQ03001 7570 aaKnown RBP2.46□□□□□ -2.02
ATXN3-235ENST00000556082 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
ATXN3-235ENST00000556082 NEBP20929 6669 aa2.43□□□□□ -2.02
ATXN3-235ENST00000556082 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
ATXN3-235ENST00000556082 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
ATXN3-235ENST00000556082 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
ATXN3-235ENST00000556082 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
ATXN3-235ENST00000556082 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
ATXN3-235ENST00000556082 KRTAP20-1Q3LI63 56 aa2.21□□□□□ -2.06
ATXN3-235ENST00000556082 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
ATXN3-235ENST00000556082 MT4P47944 62 aa2.16□□□□□ -2.06
ATXN3-235ENST00000556082 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
ATXN3-235ENST00000556082 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
ATXN3-235ENST00000556082 PRM1P04553 51 aa1.94□□□□□ -2.1
ATXN3-235ENST00000556082 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
ATXN3-235ENST00000556082 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
ATXN3-235ENST00000556082 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
ATXN3-235ENST00000556082 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
ATXN3-235ENST00000556082 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
ATXN3-235ENST00000556082 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
ATXN3-235ENST00000556082 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
ATXN3-235ENST00000556082 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
ATXN3-235ENST00000556082 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 60 ms