RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
XRCC3-215ENST00000555964 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
XRCC3-215ENST00000555964 SMIM26A0A096LP01 95 aa5.82□□□□□ -1.48
XRCC3-215ENST00000555964 TNP1P09430 55 aa5.82□□□□□ -1.48
XRCC3-215ENST00000555964 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
XRCC3-215ENST00000555964 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
XRCC3-215ENST00000555964 KRTAP5-7Q6L8G8 165 aa5.8□□□□□ -1.48
XRCC3-215ENST00000555964 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
XRCC3-215ENST00000555964 A0A1B0GU69 56 aa5.7□□□□□ -1.5
XRCC3-215ENST00000555964 KRTAP20-2Q3LI61 65 aa5.66□□□□□ -1.5
XRCC3-215ENST00000555964 A8MU10 97 aa5.65□□□□□ -1.5
XRCC3-215ENST00000555964 SPRR5A0A1B0GTR4 108 aa5.63□□□□□ -1.51
XRCC3-215ENST00000555964 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
XRCC3-215ENST00000555964 KRTAP12-4P60329 112 aa5.6□□□□□ -1.51
XRCC3-215ENST00000555964 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
XRCC3-215ENST00000555964 COX7CP15954 63 aa5.57□□□□□ -1.52
XRCC3-215ENST00000555964 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
XRCC3-215ENST00000555964 H7BZZ5 65 aa5.56□□□□□ -1.52
XRCC3-215ENST00000555964 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
XRCC3-215ENST00000555964 PRR15LQ9BU68 103 aa5.49□□□□□ -1.53
XRCC3-215ENST00000555964 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
XRCC3-215ENST00000555964 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
XRCC3-215ENST00000555964 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
XRCC3-215ENST00000555964 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
XRCC3-215ENST00000555964 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
XRCC3-215ENST00000555964 UQCR11O14957 56 aa5.25□□□□□ -1.57
XRCC3-215ENST00000555964 ATP5EP56381 51 aaPredicted RBP5.24□□□□□ -1.57
XRCC3-215ENST00000555964 KRTAP4-2Q9BYR5 136 aa5.2□□□□□ -1.58
XRCC3-215ENST00000555964 ANAPC13Q9BS18 74 aa5.18□□□□□ -1.58
XRCC3-215ENST00000555964 KRTAP5-2Q701N4 177 aa5.17□□□□□ -1.58
XRCC3-215ENST00000555964 K7ERS5 55 aa5.15□□□□□ -1.59
XRCC3-215ENST00000555964 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
XRCC3-215ENST00000555964 MT1AP04731 61 aa5.12□□□□□ -1.59
XRCC3-215ENST00000555964 MIR22HGQ0VDD5 57 aa5.07□□□□□ -1.6
XRCC3-215ENST00000555964 KRTAP5-8O75690 187 aa5.06□□□□□ -1.6
XRCC3-215ENST00000555964 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
XRCC3-215ENST00000555964 PCP4P48539 62 aa5.05□□□□□ -1.6
XRCC3-215ENST00000555964 CCDC179H3BU77 68 aa5.04□□□□□ -1.6
XRCC3-215ENST00000555964 MUC5ACP98088 5654 aa4.95□□□□□ -1.62
XRCC3-215ENST00000555964 AHNAKQ09666 5890 aaKnown RBP4.94□□□□□ -1.62
XRCC3-215ENST00000555964 MUC5BQ9HC84 5762 aaPredicted RBP4.93□□□□□ -1.62
XRCC3-215ENST00000555964 TMEM258P61165 79 aa4.92□□□□□ -1.62
XRCC3-215ENST00000555964 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
XRCC3-215ENST00000555964 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
XRCC3-215ENST00000555964 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
XRCC3-215ENST00000555964 V9GYY9 64 aa4.79□□□□□ -1.64
XRCC3-215ENST00000555964 CDC42SE1Q9NRR8 79 aa4.78□□□□□ -1.64
XRCC3-215ENST00000555964 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
XRCC3-215ENST00000555964 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
XRCC3-215ENST00000555964 PSPHP1O15172 72 aa4.74□□□□□ -1.65
XRCC3-215ENST00000555964 MT3P25713 68 aa4.72□□□□□ -1.65
XRCC3-215ENST00000555964 Q1T7F1 81 aa4.7□□□□□ -1.66
XRCC3-215ENST00000555964 KRTAP5-1Q6L8H4 278 aa4.68□□□□□ -1.66
XRCC3-215ENST00000555964 ROMO1P60602 79 aa4.63□□□□□ -1.67
XRCC3-215ENST00000555964 A6NED7 52 aa4.61□□□□□ -1.67
XRCC3-215ENST00000555964 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
XRCC3-215ENST00000555964 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
XRCC3-215ENST00000555964 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
XRCC3-215ENST00000555964 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
XRCC3-215ENST00000555964 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
XRCC3-215ENST00000555964 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
XRCC3-215ENST00000555964 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
XRCC3-215ENST00000555964 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
XRCC3-215ENST00000555964 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
XRCC3-215ENST00000555964 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
XRCC3-215ENST00000555964 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
XRCC3-215ENST00000555964 PMAIP1Q13794 54 aa3.62□□□□□ -1.83
XRCC3-215ENST00000555964 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
XRCC3-215ENST00000555964 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
XRCC3-215ENST00000555964 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
XRCC3-215ENST00000555964 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
XRCC3-215ENST00000555964 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
XRCC3-215ENST00000555964 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
XRCC3-215ENST00000555964 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
XRCC3-215ENST00000555964 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
XRCC3-215ENST00000555964 PRM1P04553 51 aa2.32□□□□□ -2.04
XRCC3-215ENST00000555964 INE1O15225 51 aa2.13□□□□□ -2.07
XRCC3-215ENST00000555964 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 59 ms