RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
HNRNPC-221ENST00000555883 MT1MQ8N339 61 aa4.52□□□□□ -1.69
HNRNPC-221ENST00000555883 A0A1B0GU69 56 aa4.51□□□□□ -1.69
HNRNPC-221ENST00000555883 MT1LQ93083 61 aa4.51□□□□□ -1.69
HNRNPC-221ENST00000555883 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
HNRNPC-221ENST00000555883 TNP1P09430 55 aa4.45□□□□□ -1.7
HNRNPC-221ENST00000555883 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
HNRNPC-221ENST00000555883 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
HNRNPC-221ENST00000555883 A8MU10 97 aa4.43□□□□□ -1.7
HNRNPC-221ENST00000555883 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
HNRNPC-221ENST00000555883 MT4P47944 62 aa4.4□□□□□ -1.71
HNRNPC-221ENST00000555883 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
HNRNPC-221ENST00000555883 PRR15LQ9BU68 103 aa4.35□□□□□ -1.71
HNRNPC-221ENST00000555883 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
HNRNPC-221ENST00000555883 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
HNRNPC-221ENST00000555883 ANAPC13Q9BS18 74 aa4.33□□□□□ -1.72
HNRNPC-221ENST00000555883 ATP5EP56381 51 aaPredicted RBP4.32□□□□□ -1.72
HNRNPC-221ENST00000555883 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
HNRNPC-221ENST00000555883 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
HNRNPC-221ENST00000555883 LINC01558Q9Y6Z2 57 aa4.28□□□□□ -1.72
HNRNPC-221ENST00000555883 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
HNRNPC-221ENST00000555883 CCDC179H3BU77 68 aa4.23□□□□□ -1.73
HNRNPC-221ENST00000555883 UQCR11O14957 56 aa4.21□□□□□ -1.74
HNRNPC-221ENST00000555883 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
HNRNPC-221ENST00000555883 SPRR5A0A1B0GTR4 108 aa4.16□□□□□ -1.74
HNRNPC-221ENST00000555883 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
HNRNPC-221ENST00000555883 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.75
HNRNPC-221ENST00000555883 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
HNRNPC-221ENST00000555883 TMEM258P61165 79 aa4.13□□□□□ -1.75
HNRNPC-221ENST00000555883 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
HNRNPC-221ENST00000555883 PCP4P48539 62 aa4.09□□□□□ -1.75
HNRNPC-221ENST00000555883 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
HNRNPC-221ENST00000555883 K7ERS5 55 aa4.05□□□□□ -1.76
HNRNPC-221ENST00000555883 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
HNRNPC-221ENST00000555883 V9GYY9 64 aa3.96□□□□□ -1.78
HNRNPC-221ENST00000555883 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
HNRNPC-221ENST00000555883 Q1T7F1 81 aa3.91□□□□□ -1.78
HNRNPC-221ENST00000555883 PSPHP1O15172 72 aa3.89□□□□□ -1.79
HNRNPC-221ENST00000555883 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
HNRNPC-221ENST00000555883 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
HNRNPC-221ENST00000555883 MT1AP04731 61 aa3.85□□□□□ -1.79
HNRNPC-221ENST00000555883 RPS28P62857 69 aaKnown RBP3.84□□□□□ -1.79
HNRNPC-221ENST00000555883 CDC42SE1Q9NRR8 79 aa3.81□□□□□ -1.8
HNRNPC-221ENST00000555883 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
HNRNPC-221ENST00000555883 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
HNRNPC-221ENST00000555883 A6NED7 52 aa3.76□□□□□ -1.81
HNRNPC-221ENST00000555883 SVIPQ8NHG7 77 aa3.75□□□□□ -1.81
HNRNPC-221ENST00000555883 ROMO1P60602 79 aa3.73□□□□□ -1.81
HNRNPC-221ENST00000555883 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
HNRNPC-221ENST00000555883 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
HNRNPC-221ENST00000555883 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
HNRNPC-221ENST00000555883 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
HNRNPC-221ENST00000555883 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
HNRNPC-221ENST00000555883 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
HNRNPC-221ENST00000555883 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
HNRNPC-221ENST00000555883 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
HNRNPC-221ENST00000555883 MT3P25713 68 aa3.57□□□□□ -1.84
HNRNPC-221ENST00000555883 BRK1Q8WUW1 75 aa3.38□□□□□ -1.87
HNRNPC-221ENST00000555883 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
HNRNPC-221ENST00000555883 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
HNRNPC-221ENST00000555883 PMAIP1Q13794 54 aa3.18□□□□□ -1.9
HNRNPC-221ENST00000555883 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
HNRNPC-221ENST00000555883 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
HNRNPC-221ENST00000555883 PRAC1Q96KF2 57 aa3.05□□□□□ -1.92
HNRNPC-221ENST00000555883 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
HNRNPC-221ENST00000555883 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
HNRNPC-221ENST00000555883 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
HNRNPC-221ENST00000555883 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
HNRNPC-221ENST00000555883 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
HNRNPC-221ENST00000555883 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
HNRNPC-221ENST00000555883 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
HNRNPC-221ENST00000555883 LUZP6Q538Z0 58 aa2.43□□□□□ -2.02
HNRNPC-221ENST00000555883 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
HNRNPC-221ENST00000555883 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
HNRNPC-221ENST00000555883 INE1O15225 51 aa1.88□□□□□ -2.11
HNRNPC-221ENST00000555883 PRM1P04553 51 aa1.87□□□□□ -2.11
HNRNPC-221ENST00000555883 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 52.9 ms