RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 SPRR2GQ9BYE4 73 aa3.98□□□□□ -1.77
EFCAB11-208ENST00000555872 MT1FP04733 61 aa3.97□□□□□ -1.77
EFCAB11-208ENST00000555872 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
EFCAB11-208ENST00000555872 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
EFCAB11-208ENST00000555872 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
EFCAB11-208ENST00000555872 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
EFCAB11-208ENST00000555872 USH2AO75445 5202 aa3.92□□□□□ -1.78
EFCAB11-208ENST00000555872 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
EFCAB11-208ENST00000555872 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
EFCAB11-208ENST00000555872 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
EFCAB11-208ENST00000555872 KRTAP19-8Q3LI54 63 aa3.87□□□□□ -1.79
EFCAB11-208ENST00000555872 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
EFCAB11-208ENST00000555872 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.8
EFCAB11-208ENST00000555872 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
EFCAB11-208ENST00000555872 MT1BP07438 61 aa3.78□□□□□ -1.8
EFCAB11-208ENST00000555872 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
EFCAB11-208ENST00000555872 MT1XP80297 61 aa3.75□□□□□ -1.81
EFCAB11-208ENST00000555872 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
EFCAB11-208ENST00000555872 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
EFCAB11-208ENST00000555872 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
EFCAB11-208ENST00000555872 MT3P25713 68 aa3.72□□□□□ -1.81
EFCAB11-208ENST00000555872 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
EFCAB11-208ENST00000555872 KRTAP4-7Q9BYR0 210 aa3.67□□□□□ -1.82
EFCAB11-208ENST00000555872 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
EFCAB11-208ENST00000555872 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
EFCAB11-208ENST00000555872 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
EFCAB11-208ENST00000555872 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
EFCAB11-208ENST00000555872 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
EFCAB11-208ENST00000555872 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
EFCAB11-208ENST00000555872 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.83
EFCAB11-208ENST00000555872 KMT2DO14686 5537 aa3.59□□□□□ -1.84
EFCAB11-208ENST00000555872 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
EFCAB11-208ENST00000555872 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
EFCAB11-208ENST00000555872 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
EFCAB11-208ENST00000555872 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
EFCAB11-208ENST00000555872 KRTAP19-7Q3SYF9 63 aa3.34□□□□□ -1.88
EFCAB11-208ENST00000555872 SPRR2EP22531 72 aa3.31□□□□□ -1.88
EFCAB11-208ENST00000555872 SPRR2BP35325 72 aa3.31□□□□□ -1.88
EFCAB11-208ENST00000555872 SPRR2AP35326 72 aa3.31□□□□□ -1.88
EFCAB11-208ENST00000555872 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
EFCAB11-208ENST00000555872 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
EFCAB11-208ENST00000555872 SPRR2DP22532 72 aa3.28□□□□□ -1.88
EFCAB11-208ENST00000555872 MT1LQ93083 61 aa3.27□□□□□ -1.89
EFCAB11-208ENST00000555872 PRM1P04553 51 aa3.21□□□□□ -1.9
EFCAB11-208ENST00000555872 MT1EP04732 61 aa3.21□□□□□ -1.9
EFCAB11-208ENST00000555872 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
EFCAB11-208ENST00000555872 MT1GP13640 62 aa3.16□□□□□ -1.9
EFCAB11-208ENST00000555872 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.9
EFCAB11-208ENST00000555872 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
EFCAB11-208ENST00000555872 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
EFCAB11-208ENST00000555872 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
EFCAB11-208ENST00000555872 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.92
EFCAB11-208ENST00000555872 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
EFCAB11-208ENST00000555872 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
EFCAB11-208ENST00000555872 MT1MQ8N339 61 aa3.02□□□□□ -1.93
EFCAB11-208ENST00000555872 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
EFCAB11-208ENST00000555872 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
EFCAB11-208ENST00000555872 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
EFCAB11-208ENST00000555872 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
EFCAB11-208ENST00000555872 MT1AP04731 61 aa2.92□□□□□ -1.94
EFCAB11-208ENST00000555872 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
EFCAB11-208ENST00000555872 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
EFCAB11-208ENST00000555872 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
EFCAB11-208ENST00000555872 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
EFCAB11-208ENST00000555872 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
EFCAB11-208ENST00000555872 KRTAP5-8O75690 187 aa2.57□□□□□ -2
EFCAB11-208ENST00000555872 MT4P47944 62 aa2.57□□□□□ -2
EFCAB11-208ENST00000555872 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
EFCAB11-208ENST00000555872 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
EFCAB11-208ENST00000555872 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
EFCAB11-208ENST00000555872 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
EFCAB11-208ENST00000555872 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
EFCAB11-208ENST00000555872 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
EFCAB11-208ENST00000555872 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
EFCAB11-208ENST00000555872 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
EFCAB11-208ENST00000555872 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
EFCAB11-208ENST00000555872 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 78.8 ms