RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 TNP1P09430 55 aa5.53□□□□□ -1.52
SNX6-205ENST00000555648 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
SNX6-205ENST00000555648 DSTQ03001 7570 aaKnown RBP5.52□□□□□ -1.53
SNX6-205ENST00000555648 MT1LQ93083 61 aa5.48□□□□□ -1.53
SNX6-205ENST00000555648 MT1MQ8N339 61 aa5.47□□□□□ -1.53
SNX6-205ENST00000555648 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
SNX6-205ENST00000555648 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.54
SNX6-205ENST00000555648 ATP5EP56381 51 aaPredicted RBP5.42□□□□□ -1.54
SNX6-205ENST00000555648 MT4P47944 62 aa5.4□□□□□ -1.54
SNX6-205ENST00000555648 CCDC179H3BU77 68 aa5.38□□□□□ -1.55
SNX6-205ENST00000555648 GPR98Q8WXG9 6306 aa5.38□□□□□ -1.55
SNX6-205ENST00000555648 LINC01558Q9Y6Z2 57 aa5.34□□□□□ -1.55
SNX6-205ENST00000555648 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
SNX6-205ENST00000555648 UQCR11O14957 56 aa5.29□□□□□ -1.56
SNX6-205ENST00000555648 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
SNX6-205ENST00000555648 KRTAP5-4Q6L8H1 288 aa5.24□□□□□ -1.57
SNX6-205ENST00000555648 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
SNX6-205ENST00000555648 TMEM258P61165 79 aa5.21□□□□□ -1.58
SNX6-205ENST00000555648 HMCN1Q96RW7 5635 aa5.17□□□□□ -1.58
SNX6-205ENST00000555648 K7ERS5 55 aa5.17□□□□□ -1.58
SNX6-205ENST00000555648 MIR22HGQ0VDD5 57 aa5.15□□□□□ -1.59
SNX6-205ENST00000555648 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
SNX6-205ENST00000555648 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
SNX6-205ENST00000555648 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
SNX6-205ENST00000555648 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
SNX6-205ENST00000555648 V9GYY9 64 aa5.02□□□□□ -1.61
SNX6-205ENST00000555648 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
SNX6-205ENST00000555648 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
SNX6-205ENST00000555648 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
SNX6-205ENST00000555648 PSPHP1O15172 72 aa4.98□□□□□ -1.61
SNX6-205ENST00000555648 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
SNX6-205ENST00000555648 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
SNX6-205ENST00000555648 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
SNX6-205ENST00000555648 KRTAP5-7Q6L8G8 165 aa4.9□□□□□ -1.63
SNX6-205ENST00000555648 Q1T7F1 81 aa4.89□□□□□ -1.63
SNX6-205ENST00000555648 A6NED7 52 aa4.84□□□□□ -1.63
SNX6-205ENST00000555648 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
SNX6-205ENST00000555648 CDC42SE1Q9NRR8 79 aa4.82□□□□□ -1.64
SNX6-205ENST00000555648 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
SNX6-205ENST00000555648 ROMO1P60602 79 aa4.71□□□□□ -1.66
SNX6-205ENST00000555648 MT1AP04731 61 aa4.67□□□□□ -1.66
SNX6-205ENST00000555648 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
SNX6-205ENST00000555648 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
SNX6-205ENST00000555648 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
SNX6-205ENST00000555648 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
SNX6-205ENST00000555648 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
SNX6-205ENST00000555648 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
SNX6-205ENST00000555648 PCP4P48539 62 aa4.34□□□□□ -1.71
SNX6-205ENST00000555648 MT3P25713 68 aa4.31□□□□□ -1.72
SNX6-205ENST00000555648 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
SNX6-205ENST00000555648 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
SNX6-205ENST00000555648 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
SNX6-205ENST00000555648 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
SNX6-205ENST00000555648 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
SNX6-205ENST00000555648 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
SNX6-205ENST00000555648 BRK1Q8WUW1 75 aa4□□□□□ -1.77
SNX6-205ENST00000555648 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
SNX6-205ENST00000555648 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
SNX6-205ENST00000555648 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
SNX6-205ENST00000555648 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
SNX6-205ENST00000555648 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
SNX6-205ENST00000555648 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
SNX6-205ENST00000555648 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
SNX6-205ENST00000555648 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
SNX6-205ENST00000555648 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
SNX6-205ENST00000555648 PRO0628Q9UI54 55 aa3.29□□□□□ -1.88
SNX6-205ENST00000555648 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
SNX6-205ENST00000555648 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
SNX6-205ENST00000555648 KTN1-AS1Q86SY8 53 aa3.21□□□□□ -1.9
SNX6-205ENST00000555648 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
SNX6-205ENST00000555648 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
SNX6-205ENST00000555648 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
SNX6-205ENST00000555648 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
SNX6-205ENST00000555648 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
SNX6-205ENST00000555648 PRM1P04553 51 aa2.39□□□□□ -2.03
SNX6-205ENST00000555648 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
SNX6-205ENST00000555648 INE1O15225 51 aa1.84□□□□□ -2.11
SNX6-205ENST00000555648 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 7.1 ms