RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 H3BS24 57 aa6.41□□□□□ -1.38
GABRB3-209ENST00000555632 KRTAP9-6A8MVA2 160 aa6.35□□□□□ -1.39
GABRB3-209ENST00000555632 SPRR2FQ96RM1 72 aa6.32□□□□□ -1.4
GABRB3-209ENST00000555632 KRTAP19-3Q7Z4W3 81 aa6.27□□□□□ -1.41
GABRB3-209ENST00000555632 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
GABRB3-209ENST00000555632 KRTAP4-3Q9BYR4 195 aa6.25□□□□□ -1.41
GABRB3-209ENST00000555632 MDN1Q9NU22 5596 aa6.24□□□□□ -1.41
GABRB3-209ENST00000555632 DSTQ03001 7570 aaKnown RBP6.21□□□□□ -1.41
GABRB3-209ENST00000555632 MT1MQ8N339 61 aa6.2□□□□□ -1.42
GABRB3-209ENST00000555632 MT1GP13640 62 aa6.19□□□□□ -1.42
GABRB3-209ENST00000555632 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
GABRB3-209ENST00000555632 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
GABRB3-209ENST00000555632 KRTAP5-9P26371 169 aa6.09□□□□□ -1.43
GABRB3-209ENST00000555632 LCE1AQ5T7P2 110 aa5.99□□□□□ -1.45
GABRB3-209ENST00000555632 KRTAP9-6A0A140TA67 174 aa5.97□□□□□ -1.45
GABRB3-209ENST00000555632 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.96□□□□□ -1.46
GABRB3-209ENST00000555632 A0A0A0MQY5 61 aa5.89□□□□□ -1.47
GABRB3-209ENST00000555632 SPRR2EP22531 72 aa5.89□□□□□ -1.47
GABRB3-209ENST00000555632 SPRR2BP35325 72 aa5.89□□□□□ -1.47
GABRB3-209ENST00000555632 SPRR2AP35326 72 aa5.89□□□□□ -1.47
GABRB3-209ENST00000555632 KRTAP2-3P0C7H8 128 aa5.85□□□□□ -1.47
GABRB3-209ENST00000555632 KRTAP2-4Q9BYR9 128 aa5.85□□□□□ -1.47
GABRB3-209ENST00000555632 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
GABRB3-209ENST00000555632 KRTAP6-3Q3LI67 103 aa5.82□□□□□ -1.48
GABRB3-209ENST00000555632 SPRR2DP22532 72 aa5.65□□□□□ -1.5
GABRB3-209ENST00000555632 NEBP20929 6669 aa5.59□□□□□ -1.52
GABRB3-209ENST00000555632 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
GABRB3-209ENST00000555632 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
GABRB3-209ENST00000555632 KRTAP9-7A8MTY7 169 aa5.53□□□□□ -1.52
GABRB3-209ENST00000555632 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
GABRB3-209ENST00000555632 MT1AP04731 61 aa5.47□□□□□ -1.53
GABRB3-209ENST00000555632 INE1O15225 51 aa5.45□□□□□ -1.54
GABRB3-209ENST00000555632 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
GABRB3-209ENST00000555632 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
GABRB3-209ENST00000555632 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
GABRB3-209ENST00000555632 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.59
GABRB3-209ENST00000555632 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
GABRB3-209ENST00000555632 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
GABRB3-209ENST00000555632 KRTAP6-2Q3LI66 62 aa5.05□□□□□ -1.6
GABRB3-209ENST00000555632 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
GABRB3-209ENST00000555632 MT4P47944 62 aa4.99□□□□□ -1.61
GABRB3-209ENST00000555632 LCE3DQ9BYE3 92 aa4.96□□□□□ -1.62
GABRB3-209ENST00000555632 KRTAP2-2Q9BYT5 123 aa4.95□□□□□ -1.62
GABRB3-209ENST00000555632 MT3P25713 68 aa4.93□□□□□ -1.62
GABRB3-209ENST00000555632 LCE4AQ5TA78 99 aa4.91□□□□□ -1.62
GABRB3-209ENST00000555632 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
GABRB3-209ENST00000555632 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
GABRB3-209ENST00000555632 KRTAP20-2Q3LI61 65 aa4.84□□□□□ -1.64
GABRB3-209ENST00000555632 LCE3EQ5T5B0 92 aa4.83□□□□□ -1.64
GABRB3-209ENST00000555632 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
GABRB3-209ENST00000555632 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
GABRB3-209ENST00000555632 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.67
GABRB3-209ENST00000555632 PRM1P04553 51 aa4.41□□□□□ -1.7
GABRB3-209ENST00000555632 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
GABRB3-209ENST00000555632 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
GABRB3-209ENST00000555632 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
GABRB3-209ENST00000555632 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
GABRB3-209ENST00000555632 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
GABRB3-209ENST00000555632 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
GABRB3-209ENST00000555632 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
GABRB3-209ENST00000555632 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
GABRB3-209ENST00000555632 KRTAP5-8O75690 187 aa3.98□□□□□ -1.77
GABRB3-209ENST00000555632 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
GABRB3-209ENST00000555632 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
GABRB3-209ENST00000555632 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
GABRB3-209ENST00000555632 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.82
GABRB3-209ENST00000555632 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
GABRB3-209ENST00000555632 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
GABRB3-209ENST00000555632 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
GABRB3-209ENST00000555632 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
GABRB3-209ENST00000555632 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
GABRB3-209ENST00000555632 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
GABRB3-209ENST00000555632 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
GABRB3-209ENST00000555632 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
GABRB3-209ENST00000555632 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
GABRB3-209ENST00000555632 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
GABRB3-209ENST00000555632 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
GABRB3-209ENST00000555632 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 79.6 ms