RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
TUBB3-209ENST00000555609 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
TUBB3-209ENST00000555609 MT1EP04732 61 aa5.6□□□□□ -1.51
TUBB3-209ENST00000555609 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
TUBB3-209ENST00000555609 MT1LQ93083 61 aa5.6□□□□□ -1.51
TUBB3-209ENST00000555609 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
TUBB3-209ENST00000555609 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
TUBB3-209ENST00000555609 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
TUBB3-209ENST00000555609 KMT2DO14686 5537 aa5.56□□□□□ -1.52
TUBB3-209ENST00000555609 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
TUBB3-209ENST00000555609 MUC12Q9UKN1 5478 aa5.39□□□□□ -1.55
TUBB3-209ENST00000555609 KRTAP6-3Q3LI67 103 aa5.39□□□□□ -1.55
TUBB3-209ENST00000555609 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
TUBB3-209ENST00000555609 MT1GP13640 62 aa5.28□□□□□ -1.56
TUBB3-209ENST00000555609 KRTAP5-9P26371 169 aa5.25□□□□□ -1.57
TUBB3-209ENST00000555609 KRTAP19-3Q7Z4W3 81 aa5.24□□□□□ -1.57
TUBB3-209ENST00000555609 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
TUBB3-209ENST00000555609 NEBP20929 6669 aa5.24□□□□□ -1.57
TUBB3-209ENST00000555609 MT1MQ8N339 61 aa5.22□□□□□ -1.57
TUBB3-209ENST00000555609 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
TUBB3-209ENST00000555609 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
TUBB3-209ENST00000555609 SPRR2EP22531 72 aa5.09□□□□□ -1.59
TUBB3-209ENST00000555609 SPRR2BP35325 72 aa5.09□□□□□ -1.59
TUBB3-209ENST00000555609 SPRR2AP35326 72 aa5.09□□□□□ -1.59
TUBB3-209ENST00000555609 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
TUBB3-209ENST00000555609 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
TUBB3-209ENST00000555609 SPRR2DP22532 72 aa4.91□□□□□ -1.62
TUBB3-209ENST00000555609 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
TUBB3-209ENST00000555609 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
TUBB3-209ENST00000555609 MT1AP04731 61 aa4.84□□□□□ -1.63
TUBB3-209ENST00000555609 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
TUBB3-209ENST00000555609 LCE3BQ5TA77 95 aa4.75□□□□□ -1.65
TUBB3-209ENST00000555609 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
TUBB3-209ENST00000555609 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
TUBB3-209ENST00000555609 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
TUBB3-209ENST00000555609 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
TUBB3-209ENST00000555609 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
TUBB3-209ENST00000555609 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
TUBB3-209ENST00000555609 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
TUBB3-209ENST00000555609 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
TUBB3-209ENST00000555609 MT4P47944 62 aa4.32□□□□□ -1.72
TUBB3-209ENST00000555609 PRM1P04553 51 aa4.3□□□□□ -1.72
TUBB3-209ENST00000555609 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
TUBB3-209ENST00000555609 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
TUBB3-209ENST00000555609 MT3P25713 68 aa4.29□□□□□ -1.72
TUBB3-209ENST00000555609 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
TUBB3-209ENST00000555609 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
TUBB3-209ENST00000555609 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
TUBB3-209ENST00000555609 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
TUBB3-209ENST00000555609 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
TUBB3-209ENST00000555609 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
TUBB3-209ENST00000555609 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
TUBB3-209ENST00000555609 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
TUBB3-209ENST00000555609 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
TUBB3-209ENST00000555609 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
TUBB3-209ENST00000555609 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
TUBB3-209ENST00000555609 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
TUBB3-209ENST00000555609 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
TUBB3-209ENST00000555609 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
TUBB3-209ENST00000555609 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
TUBB3-209ENST00000555609 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
TUBB3-209ENST00000555609 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
TUBB3-209ENST00000555609 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
TUBB3-209ENST00000555609 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
TUBB3-209ENST00000555609 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
TUBB3-209ENST00000555609 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
TUBB3-209ENST00000555609 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
TUBB3-209ENST00000555609 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
TUBB3-209ENST00000555609 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
TUBB3-209ENST00000555609 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
TUBB3-209ENST00000555609 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
TUBB3-209ENST00000555609 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
TUBB3-209ENST00000555609 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
TUBB3-209ENST00000555609 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
TUBB3-209ENST00000555609 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
TUBB3-209ENST00000555609 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
TUBB3-209ENST00000555609 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
TUBB3-209ENST00000555609 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 163 ms