RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 A8MU10 97 aa5□□□□□ -1.61
PCNX4-209ENST00000555569 MT1GP13640 62 aa5□□□□□ -1.61
PCNX4-209ENST00000555569 ANAPC13Q9BS18 74 aa4.99□□□□□ -1.61
PCNX4-209ENST00000555569 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
PCNX4-209ENST00000555569 KRTAP5-11Q6L8G4 156 aa4.94□□□□□ -1.62
PCNX4-209ENST00000555569 MT1LQ93083 61 aa4.92□□□□□ -1.62
PCNX4-209ENST00000555569 TNP1P09430 55 aa4.91□□□□□ -1.62
PCNX4-209ENST00000555569 MT1MQ8N339 61 aa4.91□□□□□ -1.62
PCNX4-209ENST00000555569 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
PCNX4-209ENST00000555569 CCDC179H3BU77 68 aa4.9□□□□□ -1.63
PCNX4-209ENST00000555569 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
PCNX4-209ENST00000555569 PRR15LQ9BU68 103 aa4.9□□□□□ -1.63
PCNX4-209ENST00000555569 ATP5EP56381 51 aaPredicted RBP4.88□□□□□ -1.63
PCNX4-209ENST00000555569 LINC01558Q9Y6Z2 57 aa4.83□□□□□ -1.64
PCNX4-209ENST00000555569 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
PCNX4-209ENST00000555569 GPR98Q8WXG9 6306 aa4.8□□□□□ -1.64
PCNX4-209ENST00000555569 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
PCNX4-209ENST00000555569 MT4P47944 62 aa4.77□□□□□ -1.65
PCNX4-209ENST00000555569 UQCR11O14957 56 aa4.72□□□□□ -1.65
PCNX4-209ENST00000555569 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
PCNX4-209ENST00000555569 TMEM258P61165 79 aa4.71□□□□□ -1.66
PCNX4-209ENST00000555569 KRTAP5-4Q6L8H1 288 aa4.71□□□□□ -1.66
PCNX4-209ENST00000555569 HMCN1Q96RW7 5635 aa4.67□□□□□ -1.66
PCNX4-209ENST00000555569 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
PCNX4-209ENST00000555569 MIR22HGQ0VDD5 57 aa4.61□□□□□ -1.67
PCNX4-209ENST00000555569 KRTAP25-1Q3LHN0 102 aa4.6□□□□□ -1.67
PCNX4-209ENST00000555569 K7ERS5 55 aa4.55□□□□□ -1.68
PCNX4-209ENST00000555569 KRTAP5-1Q6L8H4 278 aa4.55□□□□□ -1.68
PCNX4-209ENST00000555569 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
PCNX4-209ENST00000555569 KRTAP5-10Q6L8G5 202 aa4.51□□□□□ -1.69
PCNX4-209ENST00000555569 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
PCNX4-209ENST00000555569 V9GYY9 64 aa4.49□□□□□ -1.69
PCNX4-209ENST00000555569 PSPHP1O15172 72 aa4.48□□□□□ -1.69
PCNX4-209ENST00000555569 PCP4P48539 62 aa4.48□□□□□ -1.69
PCNX4-209ENST00000555569 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
PCNX4-209ENST00000555569 Q1T7F1 81 aa4.44□□□□□ -1.7
PCNX4-209ENST00000555569 KRTAP4-4Q9BYR3 166 aa4.44□□□□□ -1.7
PCNX4-209ENST00000555569 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
PCNX4-209ENST00000555569 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
PCNX4-209ENST00000555569 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
PCNX4-209ENST00000555569 A6NED7 52 aa4.33□□□□□ -1.72
PCNX4-209ENST00000555569 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
PCNX4-209ENST00000555569 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
PCNX4-209ENST00000555569 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
PCNX4-209ENST00000555569 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
PCNX4-209ENST00000555569 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
PCNX4-209ENST00000555569 ROMO1P60602 79 aa4.21□□□□□ -1.74
PCNX4-209ENST00000555569 MT1AP04731 61 aa4.18□□□□□ -1.74
PCNX4-209ENST00000555569 RPS28P62857 69 aaKnown RBP4.18□□□□□ -1.74
PCNX4-209ENST00000555569 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
PCNX4-209ENST00000555569 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
PCNX4-209ENST00000555569 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
PCNX4-209ENST00000555569 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
PCNX4-209ENST00000555569 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
PCNX4-209ENST00000555569 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
PCNX4-209ENST00000555569 MT3P25713 68 aa3.83□□□□□ -1.8
PCNX4-209ENST00000555569 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
PCNX4-209ENST00000555569 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
PCNX4-209ENST00000555569 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
PCNX4-209ENST00000555569 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
PCNX4-209ENST00000555569 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
PCNX4-209ENST00000555569 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
PCNX4-209ENST00000555569 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
PCNX4-209ENST00000555569 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
PCNX4-209ENST00000555569 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
PCNX4-209ENST00000555569 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
PCNX4-209ENST00000555569 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
PCNX4-209ENST00000555569 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
PCNX4-209ENST00000555569 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
PCNX4-209ENST00000555569 KTN1-AS1Q86SY8 53 aa2.92□□□□□ -1.94
PCNX4-209ENST00000555569 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
PCNX4-209ENST00000555569 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
PCNX4-209ENST00000555569 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
PCNX4-209ENST00000555569 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
PCNX4-209ENST00000555569 PRM1P04553 51 aa2.15□□□□□ -2.07
PCNX4-209ENST00000555569 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
PCNX4-209ENST00000555569 INE1O15225 51 aa1.86□□□□□ -2.11
PCNX4-209ENST00000555569 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms