RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 KRTAP4-7Q9BYR0 210 aa5.38□□□□□ -1.55
NEDD1-207ENST00000555114 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
NEDD1-207ENST00000555114 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
NEDD1-207ENST00000555114 K7ERU9 68 aa5.33□□□□□ -1.56
NEDD1-207ENST00000555114 SERP2Q8N6R1 65 aa5.33□□□□□ -1.56
NEDD1-207ENST00000555114 LCE3AQ5TA76 89 aa5.31□□□□□ -1.56
NEDD1-207ENST00000555114 SMIM26A0A096LP01 95 aa5.3□□□□□ -1.56
NEDD1-207ENST00000555114 TNP1P09430 55 aa5.3□□□□□ -1.56
NEDD1-207ENST00000555114 KRTAP5-7Q6L8G8 165 aa5.3□□□□□ -1.56
NEDD1-207ENST00000555114 PCP4P48539 62 aa5.28□□□□□ -1.56
NEDD1-207ENST00000555114 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
NEDD1-207ENST00000555114 A0A1B0GU69 56 aa5.19□□□□□ -1.58
NEDD1-207ENST00000555114 A8MU10 97 aa5.17□□□□□ -1.58
NEDD1-207ENST00000555114 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
NEDD1-207ENST00000555114 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
NEDD1-207ENST00000555114 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
NEDD1-207ENST00000555114 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
NEDD1-207ENST00000555114 KRTAP4-11Q9BYQ6 195 aa5.12□□□□□ -1.59
NEDD1-207ENST00000555114 KRTAP12-4P60329 112 aa5.11□□□□□ -1.59
NEDD1-207ENST00000555114 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
NEDD1-207ENST00000555114 COX7CP15954 63 aa5.06□□□□□ -1.6
NEDD1-207ENST00000555114 H7BZZ5 65 aa5.04□□□□□ -1.6
NEDD1-207ENST00000555114 PRR15LQ9BU68 103 aa4.98□□□□□ -1.61
NEDD1-207ENST00000555114 A0A0A0MQY5 61 aa4.92□□□□□ -1.62
NEDD1-207ENST00000555114 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
NEDD1-207ENST00000555114 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
NEDD1-207ENST00000555114 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
NEDD1-207ENST00000555114 LINC01558Q9Y6Z2 57 aa4.78□□□□□ -1.64
NEDD1-207ENST00000555114 UQCR11O14957 56 aa4.77□□□□□ -1.65
NEDD1-207ENST00000555114 ATP5EP56381 51 aaPredicted RBP4.73□□□□□ -1.65
NEDD1-207ENST00000555114 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
NEDD1-207ENST00000555114 ANAPC13Q9BS18 74 aa4.71□□□□□ -1.66
NEDD1-207ENST00000555114 K7ERS5 55 aa4.68□□□□□ -1.66
NEDD1-207ENST00000555114 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
NEDD1-207ENST00000555114 MT1AP04731 61 aa4.67□□□□□ -1.66
NEDD1-207ENST00000555114 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
NEDD1-207ENST00000555114 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
NEDD1-207ENST00000555114 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
NEDD1-207ENST00000555114 CCDC179H3BU77 68 aa4.58□□□□□ -1.68
NEDD1-207ENST00000555114 AHNAKQ09666 5890 aaKnown RBP4.57□□□□□ -1.68
NEDD1-207ENST00000555114 MUC5BQ9HC84 5762 aaPredicted RBP4.56□□□□□ -1.68
NEDD1-207ENST00000555114 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
NEDD1-207ENST00000555114 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
NEDD1-207ENST00000555114 TMEM258P61165 79 aa4.45□□□□□ -1.7
NEDD1-207ENST00000555114 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
NEDD1-207ENST00000555114 RPS28P62857 69 aaKnown RBP4.37□□□□□ -1.71
NEDD1-207ENST00000555114 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
NEDD1-207ENST00000555114 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.71
NEDD1-207ENST00000555114 V9GYY9 64 aa4.34□□□□□ -1.71
NEDD1-207ENST00000555114 PSPHP1O15172 72 aa4.31□□□□□ -1.72
NEDD1-207ENST00000555114 MT3P25713 68 aa4.31□□□□□ -1.72
NEDD1-207ENST00000555114 Q1T7F1 81 aa4.28□□□□□ -1.72
NEDD1-207ENST00000555114 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
NEDD1-207ENST00000555114 ROMO1P60602 79 aa4.22□□□□□ -1.73
NEDD1-207ENST00000555114 A6NED7 52 aa4.19□□□□□ -1.74
NEDD1-207ENST00000555114 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
NEDD1-207ENST00000555114 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
NEDD1-207ENST00000555114 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
NEDD1-207ENST00000555114 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
NEDD1-207ENST00000555114 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
NEDD1-207ENST00000555114 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
NEDD1-207ENST00000555114 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
NEDD1-207ENST00000555114 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
NEDD1-207ENST00000555114 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
NEDD1-207ENST00000555114 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
NEDD1-207ENST00000555114 BRK1Q8WUW1 75 aa3.17□□□□□ -1.9
NEDD1-207ENST00000555114 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
NEDD1-207ENST00000555114 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
NEDD1-207ENST00000555114 PMAIP1Q13794 54 aa2.96□□□□□ -1.94
NEDD1-207ENST00000555114 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
NEDD1-207ENST00000555114 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
NEDD1-207ENST00000555114 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
NEDD1-207ENST00000555114 PRO0628Q9UI54 55 aa2.61□□□□□ -1.99
NEDD1-207ENST00000555114 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
NEDD1-207ENST00000555114 KTN1-AS1Q86SY8 53 aa2.39□□□□□ -2.03
NEDD1-207ENST00000555114 PRM1P04553 51 aa2.12□□□□□ -2.07
NEDD1-207ENST00000555114 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
NEDD1-207ENST00000555114 INE1O15225 51 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 31.8 ms