RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 LCA10Q71F78 164 aa2.19□□□□□ -2.06
ATXN3-231ENST00000554994 CDC42SE1Q9NRR8 79 aa2.19□□□□□ -2.06
ATXN3-231ENST00000554994 SPRR2EP22531 72 aa2.18□□□□□ -2.06
ATXN3-231ENST00000554994 SPRR2BP35325 72 aa2.18□□□□□ -2.06
ATXN3-231ENST00000554994 SPRR2AP35326 72 aa2.18□□□□□ -2.06
ATXN3-231ENST00000554994 SEC61GP60059 68 aa2.18□□□□□ -2.06
ATXN3-231ENST00000554994 PRR15LQ9BU68 103 aa2.18□□□□□ -2.06
ATXN3-231ENST00000554994 A6NED7 52 aa2.17□□□□□ -2.06
ATXN3-231ENST00000554994 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
ATXN3-231ENST00000554994 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
ATXN3-231ENST00000554994 A6NN06 94 aa2.13□□□□□ -2.07
ATXN3-231ENST00000554994 ADM2Q7Z4H4 148 aa2.12□□□□□ -2.07
ATXN3-231ENST00000554994 SPTSSBQ8NFR3 76 aa2.12□□□□□ -2.07
ATXN3-231ENST00000554994 SPRR2DP22532 72 aa2.11□□□□□ -2.07
ATXN3-231ENST00000554994 SPATA8Q6RVD6 105 aa2.11□□□□□ -2.07
ATXN3-231ENST00000554994 SPRR2FQ96RM1 72 aa2.11□□□□□ -2.07
ATXN3-231ENST00000554994 A0A1B0GU69 56 aa2.1□□□□□ -2.07
ATXN3-231ENST00000554994 UQCR11O14957 56 aa2.1□□□□□ -2.07
ATXN3-231ENST00000554994 DSTQ03001 7570 aaKnown RBP2.1□□□□□ -2.07
ATXN3-231ENST00000554994 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
ATXN3-231ENST00000554994 A8MU10 97 aa2.07□□□□□ -2.08
ATXN3-231ENST00000554994 MIR22HGQ0VDD5 57 aa2.07□□□□□ -2.08
ATXN3-231ENST00000554994 SPRR5A0A1B0GTR4 108 aa2.06□□□□□ -2.08
ATXN3-231ENST00000554994 LINC01554Q52M75 96 aa2.06□□□□□ -2.08
ATXN3-231ENST00000554994 CRIPTQ9P021 101 aa2.06□□□□□ -2.08
ATXN3-231ENST00000554994 M0QZ58 72 aa2.05□□□□□ -2.08
ATXN3-231ENST00000554994 CAMK2N1Q7Z7J9 78 aa2.05□□□□□ -2.08
ATXN3-231ENST00000554994 R4GN34 69 aa2.05□□□□□ -2.08
ATXN3-231ENST00000554994 H0YAA0 97 aa2.04□□□□□ -2.08
ATXN3-231ENST00000554994 P0C880 135 aa2.04□□□□□ -2.08
ATXN3-231ENST00000554994 PLAC4Q8WY50 150 aa2.04□□□□□ -2.08
ATXN3-231ENST00000554994 SPRR2GQ9BYE4 73 aa2.04□□□□□ -2.08
ATXN3-231ENST00000554994 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.09
ATXN3-231ENST00000554994 KRTAP5-10Q6L8G5 202 aa2.02□□□□□ -2.09
ATXN3-231ENST00000554994 MT1BP07438 61 aa2.01□□□□□ -2.09
ATXN3-231ENST00000554994 KRTAP19-8Q3LI54 63 aa2.01□□□□□ -2.09
ATXN3-231ENST00000554994 K7ERS5 55 aa2□□□□□ -2.09
ATXN3-231ENST00000554994 A0A1B0GU33 70 aa1.99□□□□□ -2.09
ATXN3-231ENST00000554994 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
ATXN3-231ENST00000554994 PRO2289Q9P1D8 64 aa1.96□□□□□ -2.1
ATXN3-231ENST00000554994 A0A0D9SG42 100 aa1.95□□□□□ -2.1
ATXN3-231ENST00000554994 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
ATXN3-231ENST00000554994 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
ATXN3-231ENST00000554994 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
ATXN3-231ENST00000554994 SPINT4Q6UDR6 99 aa1.92□□□□□ -2.1
ATXN3-231ENST00000554994 PP632Q6XCG6 107 aa1.92□□□□□ -2.1
ATXN3-231ENST00000554994 MT4P47944 62 aa1.91□□□□□ -2.1
ATXN3-231ENST00000554994 MT1XP80297 61 aa1.91□□□□□ -2.1
ATXN3-231ENST00000554994 KRTAP13-4Q3LI77 160 aa1.91□□□□□ -2.1
ATXN3-231ENST00000554994 ROMO1P60602 79 aa1.9□□□□□ -2.11
ATXN3-231ENST00000554994 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
ATXN3-231ENST00000554994 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
ATXN3-231ENST00000554994 KRTAP12-1P59990 96 aa1.83□□□□□ -2.12
ATXN3-231ENST00000554994 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
ATXN3-231ENST00000554994 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
ATXN3-231ENST00000554994 TNP1P09430 55 aa1.77□□□□□ -2.13
ATXN3-231ENST00000554994 C10orf95Q9H7T3 257 aa1.76□□□□□ -2.13
ATXN3-231ENST00000554994 KRTAP19-5Q3LI72 72 aa1.72□□□□□ -2.13
ATXN3-231ENST00000554994 LUZP6Q538Z0 58 aa1.7□□□□□ -2.14
ATXN3-231ENST00000554994 KRTAP19-7Q3SYF9 63 aa1.69□□□□□ -2.14
ATXN3-231ENST00000554994 MT1EP04732 61 aa1.68□□□□□ -2.14
ATXN3-231ENST00000554994 KRTAP19-3Q7Z4W3 81 aa1.66□□□□□ -2.14
ATXN3-231ENST00000554994 MT1GP13640 62 aa1.65□□□□□ -2.15
ATXN3-231ENST00000554994 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
ATXN3-231ENST00000554994 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
ATXN3-231ENST00000554994 KRTAP20-2Q3LI61 65 aa1.64□□□□□ -2.15
ATXN3-231ENST00000554994 MT1LQ93083 61 aa1.63□□□□□ -2.15
ATXN3-231ENST00000554994 MT1MQ8N339 61 aa1.61□□□□□ -2.15
ATXN3-231ENST00000554994 SYNE1Q8NF91 8797 aaKnown RBP1.52□□□□□ -2.17
ATXN3-231ENST00000554994 INE1O15225 51 aa1.48□□□□□ -2.17
ATXN3-231ENST00000554994 KRTAP12-4P60329 112 aa1.48□□□□□ -2.17
ATXN3-231ENST00000554994 KRTAP6-1Q3LI64 71 aa1.39□□□□□ -2.19
ATXN3-231ENST00000554994 MT1AP04731 61 aa1.38□□□□□ -2.19
ATXN3-231ENST00000554994 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
ATXN3-231ENST00000554994 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
ATXN3-231ENST00000554994 PRM1P04553 51 aa0.97□□□□□ -2.25
ATXN3-231ENST00000554994 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
ATXN3-231ENST00000554994 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 80.5 ms