RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 SPINT4Q6UDR6 99 aa3.43□□□□□ -1.86
TMEM253-204ENST00000554844 SERP1Q9Y6X1 66 aa3.41□□□□□ -1.86
TMEM253-204ENST00000554844 MT1LQ93083 61 aa3.4□□□□□ -1.87
TMEM253-204ENST00000554844 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
TMEM253-204ENST00000554844 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
TMEM253-204ENST00000554844 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
TMEM253-204ENST00000554844 SPANXA2-OT1Q8N9U9 137 aa3.37□□□□□ -1.87
TMEM253-204ENST00000554844 SNURFQ9Y675 71 aa3.37□□□□□ -1.87
TMEM253-204ENST00000554844 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
TMEM253-204ENST00000554844 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
TMEM253-204ENST00000554844 A8MU10 97 aa3.32□□□□□ -1.88
TMEM253-204ENST00000554844 C10orf95Q9H7T3 257 aa3.32□□□□□ -1.88
TMEM253-204ENST00000554844 A0A1B0GU33 70 aa3.31□□□□□ -1.88
TMEM253-204ENST00000554844 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
TMEM253-204ENST00000554844 A0A1B0GV90 55 aa3.3□□□□□ -1.88
TMEM253-204ENST00000554844 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
TMEM253-204ENST00000554844 COA5Q86WW8 74 aa3.3□□□□□ -1.88
TMEM253-204ENST00000554844 TNP1P09430 55 aa3.29□□□□□ -1.88
TMEM253-204ENST00000554844 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
TMEM253-204ENST00000554844 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
TMEM253-204ENST00000554844 SMIM26A0A096LP01 95 aa3.27□□□□□ -1.89
TMEM253-204ENST00000554844 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
TMEM253-204ENST00000554844 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
TMEM253-204ENST00000554844 SERP2Q8N6R1 65 aa3.2□□□□□ -1.9
TMEM253-204ENST00000554844 A0A1B0GU69 56 aa3.18□□□□□ -1.9
TMEM253-204ENST00000554844 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
TMEM253-204ENST00000554844 K7ERU9 68 aa3.17□□□□□ -1.9
TMEM253-204ENST00000554844 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
TMEM253-204ENST00000554844 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
TMEM253-204ENST00000554844 PRR15LQ9BU68 103 aa3.05□□□□□ -1.92
TMEM253-204ENST00000554844 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
TMEM253-204ENST00000554844 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
TMEM253-204ENST00000554844 COX7CP15954 63 aa3.02□□□□□ -1.93
TMEM253-204ENST00000554844 H7BZZ5 65 aa3□□□□□ -1.93
TMEM253-204ENST00000554844 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
TMEM253-204ENST00000554844 KRTAP25-1Q3LHN0 102 aa2.97□□□□□ -1.93
TMEM253-204ENST00000554844 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
TMEM253-204ENST00000554844 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
TMEM253-204ENST00000554844 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
TMEM253-204ENST00000554844 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
TMEM253-204ENST00000554844 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
TMEM253-204ENST00000554844 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
TMEM253-204ENST00000554844 UQCR11O14957 56 aa2.9□□□□□ -1.95
TMEM253-204ENST00000554844 MT1AP04731 61 aa2.9□□□□□ -1.95
TMEM253-204ENST00000554844 K7ERS5 55 aa2.88□□□□□ -1.95
TMEM253-204ENST00000554844 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
TMEM253-204ENST00000554844 LINC01558Q9Y6Z2 57 aa2.87□□□□□ -1.95
TMEM253-204ENST00000554844 ATP5EP56381 51 aaPredicted RBP2.84□□□□□ -1.95
TMEM253-204ENST00000554844 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
TMEM253-204ENST00000554844 ANAPC13Q9BS18 74 aa2.81□□□□□ -1.96
TMEM253-204ENST00000554844 MIR22HGQ0VDD5 57 aa2.8□□□□□ -1.96
TMEM253-204ENST00000554844 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
TMEM253-204ENST00000554844 CCDC179H3BU77 68 aa2.71□□□□□ -1.98
TMEM253-204ENST00000554844 RPS28P62857 69 aaKnown RBP2.7□□□□□ -1.98
TMEM253-204ENST00000554844 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
TMEM253-204ENST00000554844 CDC42SE1Q9NRR8 79 aa2.65□□□□□ -1.99
TMEM253-204ENST00000554844 TMEM258P61165 79 aa2.63□□□□□ -1.99
TMEM253-204ENST00000554844 PSPHP1O15172 72 aa2.61□□□□□ -1.99
TMEM253-204ENST00000554844 V9GYY9 64 aa2.6□□□□□ -1.99
TMEM253-204ENST00000554844 Q1T7F1 81 aa2.58□□□□□ -2
TMEM253-204ENST00000554844 ROMO1P60602 79 aa2.56□□□□□ -2
TMEM253-204ENST00000554844 A6NED7 52 aa2.53□□□□□ -2
TMEM253-204ENST00000554844 LUZP6Q538Z0 58 aa2.53□□□□□ -2
TMEM253-204ENST00000554844 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
TMEM253-204ENST00000554844 PRO0628Q9UI54 55 aa2.48□□□□□ -2.01
TMEM253-204ENST00000554844 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
TMEM253-204ENST00000554844 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
TMEM253-204ENST00000554844 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
TMEM253-204ENST00000554844 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
TMEM253-204ENST00000554844 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
TMEM253-204ENST00000554844 BRK1Q8WUW1 75 aa1.88□□□□□ -2.11
TMEM253-204ENST00000554844 PMAIP1Q13794 54 aa1.72□□□□□ -2.13
TMEM253-204ENST00000554844 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
TMEM253-204ENST00000554844 KTN1-AS1Q86SY8 53 aa1.7□□□□□ -2.14
TMEM253-204ENST00000554844 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
TMEM253-204ENST00000554844 PRM1P04553 51 aa1.28□□□□□ -2.2
TMEM253-204ENST00000554844 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
TMEM253-204ENST00000554844 INE1O15225 51 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 70.4 ms