RNA–Protein interactions for RNA: ENST00000554340.1

NEMP1-204, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best)

Gene NEMP1, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-204ENST00000554340 LCE3AQ5TA76 89 aa7.21□□□□□ -1.25
NEMP1-204ENST00000554340 CCDC179H3BU77 68 aa7.18□□□□□ -1.26
NEMP1-204ENST00000554340 KRTAP5-4Q6L8H1 288 aa7.15□□□□□ -1.26
NEMP1-204ENST00000554340 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
NEMP1-204ENST00000554340 AHNAK2Q8IVF2 5795 aa7.13□□□□□ -1.27
NEMP1-204ENST00000554340 KRTAP4-3Q9BYR4 195 aa7.12□□□□□ -1.27
NEMP1-204ENST00000554340 LOC100996750A0A140TA64 210 aa7.1□□□□□ -1.27
NEMP1-204ENST00000554340 KRTAP4-6Q9BYQ5 205 aa7.1□□□□□ -1.27
NEMP1-204ENST00000554340 UQCR11O14957 56 aa7.05□□□□□ -1.28
NEMP1-204ENST00000554340 KRTAP5-10Q6L8G5 202 aa7.04□□□□□ -1.28
NEMP1-204ENST00000554340 KRTAP12-3P60328 96 aa6.98□□□□□ -1.29
NEMP1-204ENST00000554340 TMEM258P61165 79 aa6.97□□□□□ -1.29
NEMP1-204ENST00000554340 KRTAP4-7Q9BYR0 210 aa6.87□□□□□ -1.31
NEMP1-204ENST00000554340 K7ERS5 55 aa6.85□□□□□ -1.31
NEMP1-204ENST00000554340 MIR22HGQ0VDD5 57 aa6.85□□□□□ -1.31
NEMP1-204ENST00000554340 KRTAP25-1Q3LHN0 102 aa6.85□□□□□ -1.31
NEMP1-204ENST00000554340 KRTAP5-7Q6L8G8 165 aa6.81□□□□□ -1.32
NEMP1-204ENST00000554340 KRTAP5-3Q6L8H2 238 aa6.81□□□□□ -1.32
NEMP1-204ENST00000554340 KRTAP20-2Q3LI61 65 aa6.76□□□□□ -1.33
NEMP1-204ENST00000554340 KRTAP5-5Q701N2 237 aaPredicted RBP6.74□□□□□ -1.33
NEMP1-204ENST00000554340 V9GYY9 64 aa6.71□□□□□ -1.33
NEMP1-204ENST00000554340 SPRR5A0A1B0GTR4 108 aa6.7□□□□□ -1.34
NEMP1-204ENST00000554340 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
NEMP1-204ENST00000554340 PSPHP1O15172 72 aa6.62□□□□□ -1.35
NEMP1-204ENST00000554340 KRTAP12-4P60329 112 aa6.62□□□□□ -1.35
NEMP1-204ENST00000554340 KRTAP23-1A1A580 65 aa6.59□□□□□ -1.35
NEMP1-204ENST00000554340 Q1T7F1 81 aa6.57□□□□□ -1.36
NEMP1-204ENST00000554340 SYNE1Q8NF91 8797 aaKnown RBP6.54□□□□□ -1.36
NEMP1-204ENST00000554340 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
NEMP1-204ENST00000554340 A6NED7 52 aa6.44□□□□□ -1.38
NEMP1-204ENST00000554340 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
NEMP1-204ENST00000554340 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
NEMP1-204ENST00000554340 KRTAP4-12Q9BQ66 201 aa6.36□□□□□ -1.39
NEMP1-204ENST00000554340 RPS28P62857 69 aaKnown RBP6.28□□□□□ -1.4
NEMP1-204ENST00000554340 ROMO1P60602 79 aa6.27□□□□□ -1.41
NEMP1-204ENST00000554340 KRTAP4-11Q9BYQ6 195 aa6.24□□□□□ -1.41
NEMP1-204ENST00000554340 KRTAP5-2Q701N4 177 aa6.21□□□□□ -1.41
NEMP1-204ENST00000554340 KRTAP9-9Q9BYP9 154 aa6.18□□□□□ -1.42
NEMP1-204ENST00000554340 KRTAP9-4Q9BYQ2 154 aa6.18□□□□□ -1.42
NEMP1-204ENST00000554340 MT1AP04731 61 aa6.18□□□□□ -1.42
NEMP1-204ENST00000554340 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.43
NEMP1-204ENST00000554340 KRTAP5-8O75690 187 aa6.05□□□□□ -1.44
NEMP1-204ENST00000554340 AHNAKQ09666 5890 aaKnown RBP5.97□□□□□ -1.45
NEMP1-204ENST00000554340 MUC5ACP98088 5654 aa5.96□□□□□ -1.46
NEMP1-204ENST00000554340 MUC5BQ9HC84 5762 aaPredicted RBP5.95□□□□□ -1.46
NEMP1-204ENST00000554340 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
NEMP1-204ENST00000554340 KRTAP6-2Q3LI66 62 aa5.93□□□□□ -1.46
NEMP1-204ENST00000554340 H3BS24 57 aa5.89□□□□□ -1.47
NEMP1-204ENST00000554340 OBSCNQ5VST9 7968 aa5.85□□□□□ -1.47
NEMP1-204ENST00000554340 SVIPQ8NHG7 77 aa5.85□□□□□ -1.47
NEMP1-204ENST00000554340 PCP4P48539 62 aa5.82□□□□□ -1.48
NEMP1-204ENST00000554340 MT3P25713 68 aa5.7□□□□□ -1.5
NEMP1-204ENST00000554340 KRTAP5-1Q6L8H4 278 aa5.62□□□□□ -1.51
NEMP1-204ENST00000554340 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
NEMP1-204ENST00000554340 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
NEMP1-204ENST00000554340 LCE1EQ5T753 118 aa5.28□□□□□ -1.56
NEMP1-204ENST00000554340 PMAIP1Q13794 54 aa5.04□□□□□ -1.6
NEMP1-204ENST00000554340 LCE1BQ5T7P3 118 aa4.97□□□□□ -1.61
NEMP1-204ENST00000554340 LCE1CQ5T751 118 aa4.9□□□□□ -1.63
NEMP1-204ENST00000554340 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
NEMP1-204ENST00000554340 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
NEMP1-204ENST00000554340 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
NEMP1-204ENST00000554340 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
NEMP1-204ENST00000554340 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
NEMP1-204ENST00000554340 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
NEMP1-204ENST00000554340 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
NEMP1-204ENST00000554340 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
NEMP1-204ENST00000554340 LUZP6Q538Z0 58 aa4.26□□□□□ -1.73
NEMP1-204ENST00000554340 PHGR1C9JFL3 82 aa4.11□□□□□ -1.75
NEMP1-204ENST00000554340 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
NEMP1-204ENST00000554340 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
NEMP1-204ENST00000554340 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
NEMP1-204ENST00000554340 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
NEMP1-204ENST00000554340 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
NEMP1-204ENST00000554340 PRM1P04553 51 aa3.15□□□□□ -1.9
NEMP1-204ENST00000554340 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
NEMP1-204ENST00000554340 INE1O15225 51 aa2.75□□□□□ -1.97
NEMP1-204ENST00000554340 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 60.8 ms