RNA–Protein interactions for RNA: ENST00000554221.5

LINC00520-203, long intergenic non-protein coding RNA 520, humanhuman

TSL 3

Gene LINC00520, Length 348 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-203ENST00000554221 KRTAP19-5Q3LI72 72 aa2.42□□□□□ -2.02
LINC00520-203ENST00000554221 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
LINC00520-203ENST00000554221 CYSTM1Q9H1C7 97 aa2.41□□□□□ -2.02
LINC00520-203ENST00000554221 KRTAP9-6A8MVA2 160 aa2.4□□□□□ -2.03
LINC00520-203ENST00000554221 MT1GP13640 62 aa2.38□□□□□ -2.03
LINC00520-203ENST00000554221 KRTAP12-1P59990 96 aa2.38□□□□□ -2.03
LINC00520-203ENST00000554221 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
LINC00520-203ENST00000554221 MT4P47944 62 aa2.37□□□□□ -2.03
LINC00520-203ENST00000554221 SMIM26A0A096LP01 95 aa2.35□□□□□ -2.03
LINC00520-203ENST00000554221 A0A1B0GU69 56 aa2.34□□□□□ -2.03
LINC00520-203ENST00000554221 A8MU10 97 aa2.34□□□□□ -2.03
LINC00520-203ENST00000554221 COX7CP15954 63 aa2.34□□□□□ -2.03
LINC00520-203ENST00000554221 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
LINC00520-203ENST00000554221 MT1MQ8N339 61 aa2.33□□□□□ -2.04
LINC00520-203ENST00000554221 MT1LQ93083 61 aa2.33□□□□□ -2.04
LINC00520-203ENST00000554221 KRTAP4-3Q9BYR4 195 aa2.33□□□□□ -2.04
LINC00520-203ENST00000554221 C10orf95Q9H7T3 257 aa2.32□□□□□ -2.04
LINC00520-203ENST00000554221 TNP1P09430 55 aa2.31□□□□□ -2.04
LINC00520-203ENST00000554221 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
LINC00520-203ENST00000554221 H7BZZ5 65 aa2.3□□□□□ -2.04
LINC00520-203ENST00000554221 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
LINC00520-203ENST00000554221 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
LINC00520-203ENST00000554221 PRR15LQ9BU68 103 aa2.24□□□□□ -2.05
LINC00520-203ENST00000554221 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
LINC00520-203ENST00000554221 ANAPC13Q9BS18 74 aa2.22□□□□□ -2.05
LINC00520-203ENST00000554221 LCE3CQ5T5A8 94 aa2.21□□□□□ -2.06
LINC00520-203ENST00000554221 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
LINC00520-203ENST00000554221 CCDC179H3BU77 68 aa2.18□□□□□ -2.06
LINC00520-203ENST00000554221 LINC01558Q9Y6Z2 57 aa2.18□□□□□ -2.06
LINC00520-203ENST00000554221 UQCR11O14957 56 aa2.17□□□□□ -2.06
LINC00520-203ENST00000554221 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
LINC00520-203ENST00000554221 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
LINC00520-203ENST00000554221 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
LINC00520-203ENST00000554221 ATP5EP56381 51 aaPredicted RBP2.14□□□□□ -2.07
LINC00520-203ENST00000554221 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
LINC00520-203ENST00000554221 SPRR5A0A1B0GTR4 108 aa2.12□□□□□ -2.07
LINC00520-203ENST00000554221 KRTAP25-1Q3LHN0 102 aa2.12□□□□□ -2.07
LINC00520-203ENST00000554221 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
LINC00520-203ENST00000554221 MIR22HGQ0VDD5 57 aa2.11□□□□□ -2.07
LINC00520-203ENST00000554221 K7ERS5 55 aa2.1□□□□□ -2.07
LINC00520-203ENST00000554221 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
LINC00520-203ENST00000554221 TMEM258P61165 79 aa2.05□□□□□ -2.08
LINC00520-203ENST00000554221 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
LINC00520-203ENST00000554221 PSPHP1O15172 72 aa2.04□□□□□ -2.08
LINC00520-203ENST00000554221 PCP4P48539 62 aa2.04□□□□□ -2.08
LINC00520-203ENST00000554221 A0A0A0MQY5 61 aa2.03□□□□□ -2.08
LINC00520-203ENST00000554221 LCE3EQ5T5B0 92 aa2.01□□□□□ -2.09
LINC00520-203ENST00000554221 V9GYY9 64 aa1.99□□□□□ -2.09
LINC00520-203ENST00000554221 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
LINC00520-203ENST00000554221 NDUFAF8A1L188 74 aa1.97□□□□□ -2.09
LINC00520-203ENST00000554221 MT1AP04731 61 aa1.97□□□□□ -2.09
LINC00520-203ENST00000554221 Q1T7F1 81 aa1.97□□□□□ -2.09
LINC00520-203ENST00000554221 A6NED7 52 aa1.96□□□□□ -2.1
LINC00520-203ENST00000554221 RPS28P62857 69 aaKnown RBP1.96□□□□□ -2.1
LINC00520-203ENST00000554221 CDC42SE1Q9NRR8 79 aa1.96□□□□□ -2.1
LINC00520-203ENST00000554221 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
LINC00520-203ENST00000554221 ROMO1P60602 79 aa1.92□□□□□ -2.1
LINC00520-203ENST00000554221 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
LINC00520-203ENST00000554221 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.11
LINC00520-203ENST00000554221 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
LINC00520-203ENST00000554221 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
LINC00520-203ENST00000554221 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
LINC00520-203ENST00000554221 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
LINC00520-203ENST00000554221 PRAC1Q96KF2 57 aa1.72□□□□□ -2.13
LINC00520-203ENST00000554221 BRK1Q8WUW1 75 aa1.58□□□□□ -2.16
LINC00520-203ENST00000554221 LCE3DQ9BYE3 92 aa1.55□□□□□ -2.16
LINC00520-203ENST00000554221 SVIPQ8NHG7 77 aa1.52□□□□□ -2.17
LINC00520-203ENST00000554221 PMAIP1Q13794 54 aa1.48□□□□□ -2.17
LINC00520-203ENST00000554221 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
LINC00520-203ENST00000554221 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
LINC00520-203ENST00000554221 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
LINC00520-203ENST00000554221 LUZP6Q538Z0 58 aa1.26□□□□□ -2.21
LINC00520-203ENST00000554221 PRO0628Q9UI54 55 aa1.24□□□□□ -2.21
LINC00520-203ENST00000554221 KTN1-AS1Q86SY8 53 aa1.2□□□□□ -2.22
LINC00520-203ENST00000554221 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
LINC00520-203ENST00000554221 PRM1P04553 51 aa0.98□□□□□ -2.25
LINC00520-203ENST00000554221 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
LINC00520-203ENST00000554221 INE1O15225 51 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 106.4 ms