RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 TPRXLQ17RH7 258 aa2.21□□□□□ -2.06
ATXN3-225ENST00000554214 H1FX-AS1Q4G0G2 97 aa2.21□□□□□ -2.06
ATXN3-225ENST00000554214 SPRR1BP22528 89 aa2.19□□□□□ -2.06
ATXN3-225ENST00000554214 RPL37P61927 97 aaKnown RBP2.19□□□□□ -2.06
ATXN3-225ENST00000554214 SPACA4Q8TDM5 124 aa2.17□□□□□ -2.06
ATXN3-225ENST00000554214 NEBP20929 6669 aa2.16□□□□□ -2.06
ATXN3-225ENST00000554214 SSPOA2VEC9 5147 aa2.15□□□□□ -2.07
ATXN3-225ENST00000554214 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
ATXN3-225ENST00000554214 SPINK6Q6UWN8 80 aa2.14□□□□□ -2.07
ATXN3-225ENST00000554214 A0A096LNI7 61 aa2.13□□□□□ -2.07
ATXN3-225ENST00000554214 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
ATXN3-225ENST00000554214 PRLHP81277 87 aa2.12□□□□□ -2.07
ATXN3-225ENST00000554214 MUC17Q685J3 4493 aa2.12□□□□□ -2.07
ATXN3-225ENST00000554214 KRTAP4-1Q9BYQ7 146 aa2.11□□□□□ -2.07
ATXN3-225ENST00000554214 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
ATXN3-225ENST00000554214 SYNE2Q8WXH0 6885 aaKnown RBP2.08□□□□□ -2.08
ATXN3-225ENST00000554214 SPINK1P00995 79 aa2.08□□□□□ -2.08
ATXN3-225ENST00000554214 C10orf95Q9H7T3 257 aa2.08□□□□□ -2.08
ATXN3-225ENST00000554214 USH2AO75445 5202 aa2.08□□□□□ -2.08
ATXN3-225ENST00000554214 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
ATXN3-225ENST00000554214 FCGBPQ9Y6R7 5405 aaPredicted RBP2.04□□□□□ -2.08
ATXN3-225ENST00000554214 MT1HP80294 61 aa2.03□□□□□ -2.08
ATXN3-225ENST00000554214 S4R3F8 94 aa2.03□□□□□ -2.08
ATXN3-225ENST00000554214 KRTAP19-2Q3LHN2 52 aa2.02□□□□□ -2.09
ATXN3-225ENST00000554214 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
ATXN3-225ENST00000554214 M0R2T5 61 aa1.98□□□□□ -2.09
ATXN3-225ENST00000554214 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
ATXN3-225ENST00000554214 FLGP20930 4061 aaPredicted RBP1.96□□□□□ -2.1
ATXN3-225ENST00000554214 KRTAP20-1Q3LI63 56 aa1.96□□□□□ -2.1
ATXN3-225ENST00000554214 A0A0D9SG42 100 aa1.95□□□□□ -2.1
ATXN3-225ENST00000554214 M0QZ58 72 aa1.92□□□□□ -2.1
ATXN3-225ENST00000554214 C9orf92A6NGG3 77 aa1.91□□□□□ -2.1
ATXN3-225ENST00000554214 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
ATXN3-225ENST00000554214 KRTAP13-4Q3LI77 160 aa1.87□□□□□ -2.11
ATXN3-225ENST00000554214 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
ATXN3-225ENST00000554214 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
ATXN3-225ENST00000554214 MT2AP02795 61 aa1.85□□□□□ -2.11
ATXN3-225ENST00000554214 MT1FP04733 61 aa1.85□□□□□ -2.11
ATXN3-225ENST00000554214 KMT2DO14686 5537 aa1.82□□□□□ -2.12
ATXN3-225ENST00000554214 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
ATXN3-225ENST00000554214 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
ATXN3-225ENST00000554214 KRTAP19-6Q3LI70 58 aa1.81□□□□□ -2.12
ATXN3-225ENST00000554214 RPS29P62273 56 aaKnown RBP1.78□□□□□ -2.12
ATXN3-225ENST00000554214 TNP1P09430 55 aa1.72□□□□□ -2.13
ATXN3-225ENST00000554214 KRTAP2-3P0C7H8 128 aa1.72□□□□□ -2.13
ATXN3-225ENST00000554214 KRTAP2-4Q9BYR9 128 aa1.72□□□□□ -2.13
ATXN3-225ENST00000554214 DSTQ03001 7570 aaKnown RBP1.67□□□□□ -2.14
ATXN3-225ENST00000554214 SPRR2EP22531 72 aa1.66□□□□□ -2.14
ATXN3-225ENST00000554214 SPRR2BP35325 72 aa1.66□□□□□ -2.14
ATXN3-225ENST00000554214 SPRR2AP35326 72 aa1.66□□□□□ -2.14
ATXN3-225ENST00000554214 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
ATXN3-225ENST00000554214 KRTAP2-1Q9BYU5 128 aa1.66□□□□□ -2.14
ATXN3-225ENST00000554214 MT1BP07438 61 aa1.63□□□□□ -2.15
ATXN3-225ENST00000554214 SPRR2FQ96RM1 72 aa1.63□□□□□ -2.15
ATXN3-225ENST00000554214 SPRR2DP22532 72 aa1.6□□□□□ -2.15
ATXN3-225ENST00000554214 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
ATXN3-225ENST00000554214 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
ATXN3-225ENST00000554214 KRTAP19-8Q3LI54 63 aa1.54□□□□□ -2.16
ATXN3-225ENST00000554214 KRTAP8-1Q8IUC2 63 aa1.54□□□□□ -2.16
ATXN3-225ENST00000554214 SPRR2GQ9BYE4 73 aa1.5□□□□□ -2.17
ATXN3-225ENST00000554214 MT4P47944 62 aa1.47□□□□□ -2.17
ATXN3-225ENST00000554214 MT1XP80297 61 aa1.46□□□□□ -2.18
ATXN3-225ENST00000554214 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
ATXN3-225ENST00000554214 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
ATXN3-225ENST00000554214 MT1EP04732 61 aa1.3□□□□□ -2.2
ATXN3-225ENST00000554214 KRTAP20-2Q3LI61 65 aa1.27□□□□□ -2.21
ATXN3-225ENST00000554214 MT1MQ8N339 61 aa1.27□□□□□ -2.21
ATXN3-225ENST00000554214 MT1GP13640 62 aa1.24□□□□□ -2.21
ATXN3-225ENST00000554214 KRTAP19-5Q3LI72 72 aa1.24□□□□□ -2.21
ATXN3-225ENST00000554214 SYNE1Q8NF91 8797 aaKnown RBP1.22□□□□□ -2.21
ATXN3-225ENST00000554214 PRM1P04553 51 aa1.21□□□□□ -2.22
ATXN3-225ENST00000554214 MT1LQ93083 61 aa1.21□□□□□ -2.22
ATXN3-225ENST00000554214 MT1AP04731 61 aa1.18□□□□□ -2.22
ATXN3-225ENST00000554214 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
ATXN3-225ENST00000554214 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
ATXN3-225ENST00000554214 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
ATXN3-225ENST00000554214 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
ATXN3-225ENST00000554214 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 94.2 ms