RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 H3BPC8 53 aa2.39□□□□□ -2.03
GPHN-206ENST00000553936 CCDC179H3BU77 68 aa2.38□□□□□ -2.03
GPHN-206ENST00000553936 MP68P56378 58 aa2.38□□□□□ -2.03
GPHN-206ENST00000553936 CAMK2N1Q7Z7J9 78 aa2.38□□□□□ -2.03
GPHN-206ENST00000553936 TMEM258P61165 79 aa2.37□□□□□ -2.03
GPHN-206ENST00000553936 ATP5EP56381 51 aaPredicted RBP2.36□□□□□ -2.03
GPHN-206ENST00000553936 MT1MQ8N339 61 aa2.35□□□□□ -2.03
GPHN-206ENST00000553936 LINC00208Q96KT6 92 aa2.35□□□□□ -2.03
GPHN-206ENST00000553936 H7BZZ5 65 aa2.32□□□□□ -2.04
GPHN-206ENST00000553936 KRTAP19-5Q3LI72 72 aa2.32□□□□□ -2.04
GPHN-206ENST00000553936 SPTSSBQ8NFR3 76 aa2.32□□□□□ -2.04
GPHN-206ENST00000553936 SNURFQ9Y675 71 aa2.32□□□□□ -2.04
GPHN-206ENST00000553936 A0A0D9SG42 100 aa2.31□□□□□ -2.04
GPHN-206ENST00000553936 DMAC1Q96GE9 116 aa2.31□□□□□ -2.04
GPHN-206ENST00000553936 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
GPHN-206ENST00000553936 SPANXA2-OT1Q8N9U9 137 aa2.3□□□□□ -2.04
GPHN-206ENST00000553936 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
GPHN-206ENST00000553936 MT1LQ93083 61 aa2.29□□□□□ -2.04
GPHN-206ENST00000553936 RPS28P62857 69 aaKnown RBP2.28□□□□□ -2.04
GPHN-206ENST00000553936 PRO0628Q9UI54 55 aa2.28□□□□□ -2.04
GPHN-206ENST00000553936 SERP1Q9Y6X1 66 aa2.28□□□□□ -2.04
GPHN-206ENST00000553936 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
GPHN-206ENST00000553936 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
GPHN-206ENST00000553936 ACYP2P14621 99 aa2.25□□□□□ -2.05
GPHN-206ENST00000553936 KRTAP9-6A8MVA2 160 aa2.24□□□□□ -2.05
GPHN-206ENST00000553936 SMIM26A0A096LP01 95 aa2.23□□□□□ -2.05
GPHN-206ENST00000553936 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
GPHN-206ENST00000553936 CHKB-CPT1BH3BT56 60 aa2.22□□□□□ -2.05
GPHN-206ENST00000553936 A8MU10 97 aa2.21□□□□□ -2.06
GPHN-206ENST00000553936 COA5Q86WW8 74 aa2.2□□□□□ -2.06
GPHN-206ENST00000553936 PMAIP1Q13794 54 aa2.19□□□□□ -2.06
GPHN-206ENST00000553936 KRTAP13-4Q3LI77 160 aa2.18□□□□□ -2.06
GPHN-206ENST00000553936 Q1T7F1 81 aa2.17□□□□□ -2.06
GPHN-206ENST00000553936 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
GPHN-206ENST00000553936 C10orf95Q9H7T3 257 aa2.17□□□□□ -2.06
GPHN-206ENST00000553936 SPINT4Q6UDR6 99 aa2.16□□□□□ -2.06
GPHN-206ENST00000553936 PRR15LQ9BU68 103 aa2.15□□□□□ -2.07
GPHN-206ENST00000553936 LINC01558Q9Y6Z2 57 aa2.14□□□□□ -2.07
GPHN-206ENST00000553936 LCE3AQ5TA76 89 aa2.13□□□□□ -2.07
GPHN-206ENST00000553936 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
GPHN-206ENST00000553936 SYNE1Q8NF91 8797 aaKnown RBP2.12□□□□□ -2.07
GPHN-206ENST00000553936 TNP1P09430 55 aa2.12□□□□□ -2.07
GPHN-206ENST00000553936 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
GPHN-206ENST00000553936 A0A1B0GU69 56 aa2.11□□□□□ -2.07
GPHN-206ENST00000553936 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
GPHN-206ENST00000553936 BRK1Q8WUW1 75 aa2.11□□□□□ -2.07
GPHN-206ENST00000553936 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
GPHN-206ENST00000553936 PSPHP1O15172 72 aa2.09□□□□□ -2.07
GPHN-206ENST00000553936 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.07
GPHN-206ENST00000553936 A6NED7 52 aa2.07□□□□□ -2.08
GPHN-206ENST00000553936 KRTAP12-1P59990 96 aa2.07□□□□□ -2.08
GPHN-206ENST00000553936 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
GPHN-206ENST00000553936 KTN1-AS1Q86SY8 53 aa2.07□□□□□ -2.08
GPHN-206ENST00000553936 UQCR11O14957 56 aa2.06□□□□□ -2.08
GPHN-206ENST00000553936 SPATA8Q6RVD6 105 aa2.06□□□□□ -2.08
GPHN-206ENST00000553936 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
GPHN-206ENST00000553936 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
GPHN-206ENST00000553936 CDC42SE1Q9NRR8 79 aa2.04□□□□□ -2.08
GPHN-206ENST00000553936 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
GPHN-206ENST00000553936 A0A1B0GU33 70 aa2.03□□□□□ -2.08
GPHN-206ENST00000553936 MIR22HGQ0VDD5 57 aa2.02□□□□□ -2.09
GPHN-206ENST00000553936 K7ERS5 55 aa1.99□□□□□ -2.09
GPHN-206ENST00000553936 MT1AP04731 61 aa1.96□□□□□ -2.1
GPHN-206ENST00000553936 KRTAP6-1Q3LI64 71 aa1.94□□□□□ -2.1
GPHN-206ENST00000553936 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
GPHN-206ENST00000553936 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
GPHN-206ENST00000553936 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
GPHN-206ENST00000553936 ROMO1P60602 79 aa1.85□□□□□ -2.11
GPHN-206ENST00000553936 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
GPHN-206ENST00000553936 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
GPHN-206ENST00000553936 LCE1BQ5T7P3 118 aa1.66□□□□□ -2.14
GPHN-206ENST00000553936 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
GPHN-206ENST00000553936 INE1O15225 51 aa1.45□□□□□ -2.18
GPHN-206ENST00000553936 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
GPHN-206ENST00000553936 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
GPHN-206ENST00000553936 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
GPHN-206ENST00000553936 PRM1P04553 51 aa0.94□□□□□ -2.26
GPHN-206ENST00000553936 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 6.8 ms