RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
PSMC6-204ENST00000553798 PSPHP1O15172 72 aa4.47□□□□□ -1.69
PSMC6-204ENST00000553798 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.7
PSMC6-204ENST00000553798 MDN1Q9NU22 5596 aa4.45□□□□□ -1.7
PSMC6-204ENST00000553798 SPRR2EP22531 72 aa4.45□□□□□ -1.7
PSMC6-204ENST00000553798 SPRR2BP35325 72 aa4.45□□□□□ -1.7
PSMC6-204ENST00000553798 SPRR2AP35326 72 aa4.45□□□□□ -1.7
PSMC6-204ENST00000553798 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
PSMC6-204ENST00000553798 TNP1P09430 55 aa4.38□□□□□ -1.71
PSMC6-204ENST00000553798 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
PSMC6-204ENST00000553798 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
PSMC6-204ENST00000553798 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
PSMC6-204ENST00000553798 K7ERS5 55 aa4.34□□□□□ -1.71
PSMC6-204ENST00000553798 A6NED7 52 aa4.33□□□□□ -1.72
PSMC6-204ENST00000553798 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
PSMC6-204ENST00000553798 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
PSMC6-204ENST00000553798 MT1EP04732 61 aa4.32□□□□□ -1.72
PSMC6-204ENST00000553798 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
PSMC6-204ENST00000553798 SPRR2DP22532 72 aa4.29□□□□□ -1.72
PSMC6-204ENST00000553798 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
PSMC6-204ENST00000553798 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
PSMC6-204ENST00000553798 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
PSMC6-204ENST00000553798 CDC42SE1Q9NRR8 79 aa4.2□□□□□ -1.74
PSMC6-204ENST00000553798 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
PSMC6-204ENST00000553798 MT1GP13640 62 aa4.18□□□□□ -1.74
PSMC6-204ENST00000553798 MT1LQ93083 61 aa4.17□□□□□ -1.74
PSMC6-204ENST00000553798 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
PSMC6-204ENST00000553798 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
PSMC6-204ENST00000553798 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
PSMC6-204ENST00000553798 MT1MQ8N339 61 aa4.1□□□□□ -1.75
PSMC6-204ENST00000553798 ROMO1P60602 79 aa4.09□□□□□ -1.75
PSMC6-204ENST00000553798 GPR98Q8WXG9 6306 aa4.09□□□□□ -1.76
PSMC6-204ENST00000553798 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
PSMC6-204ENST00000553798 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
PSMC6-204ENST00000553798 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
PSMC6-204ENST00000553798 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
PSMC6-204ENST00000553798 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
PSMC6-204ENST00000553798 BRK1Q8WUW1 75 aa3.91□□□□□ -1.78
PSMC6-204ENST00000553798 MT3P25713 68 aa3.84□□□□□ -1.79
PSMC6-204ENST00000553798 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
PSMC6-204ENST00000553798 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
PSMC6-204ENST00000553798 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
PSMC6-204ENST00000553798 MT4P47944 62 aa3.73□□□□□ -1.81
PSMC6-204ENST00000553798 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
PSMC6-204ENST00000553798 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
PSMC6-204ENST00000553798 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
PSMC6-204ENST00000553798 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
PSMC6-204ENST00000553798 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
PSMC6-204ENST00000553798 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
PSMC6-204ENST00000553798 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
PSMC6-204ENST00000553798 MT1AP04731 61 aa3.55□□□□□ -1.84
PSMC6-204ENST00000553798 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
PSMC6-204ENST00000553798 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
PSMC6-204ENST00000553798 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
PSMC6-204ENST00000553798 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
PSMC6-204ENST00000553798 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
PSMC6-204ENST00000553798 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
PSMC6-204ENST00000553798 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
PSMC6-204ENST00000553798 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
PSMC6-204ENST00000553798 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
PSMC6-204ENST00000553798 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
PSMC6-204ENST00000553798 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
PSMC6-204ENST00000553798 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
PSMC6-204ENST00000553798 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
PSMC6-204ENST00000553798 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
PSMC6-204ENST00000553798 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
PSMC6-204ENST00000553798 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
PSMC6-204ENST00000553798 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
PSMC6-204ENST00000553798 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
PSMC6-204ENST00000553798 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
PSMC6-204ENST00000553798 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
PSMC6-204ENST00000553798 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
PSMC6-204ENST00000553798 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
PSMC6-204ENST00000553798 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
PSMC6-204ENST00000553798 INE1O15225 51 aa2.08□□□□□ -2.08
PSMC6-204ENST00000553798 PRM1P04553 51 aa2.08□□□□□ -2.08
PSMC6-204ENST00000553798 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
PSMC6-204ENST00000553798 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 132 ms