RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 KRTAP20-1Q3LI63 56 aa6.59□□□□□ -1.35
PSEN1-208ENST00000553719 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
PSEN1-208ENST00000553719 KRTAP19-3Q7Z4W3 81 aa6.5□□□□□ -1.37
PSEN1-208ENST00000553719 PP632Q6XCG6 107 aa6.49□□□□□ -1.37
PSEN1-208ENST00000553719 LCE5AQ5TCM9 118 aa6.47□□□□□ -1.37
PSEN1-208ENST00000553719 MT1LQ93083 61 aa6.47□□□□□ -1.37
PSEN1-208ENST00000553719 MT1GP13640 62 aa6.39□□□□□ -1.39
PSEN1-208ENST00000553719 SPRR2DP22532 72 aa6.39□□□□□ -1.39
PSEN1-208ENST00000553719 MT1MQ8N339 61 aa6.31□□□□□ -1.4
PSEN1-208ENST00000553719 PRAC1Q96KF2 57 aa6.31□□□□□ -1.4
PSEN1-208ENST00000553719 KRTAP2-3P0C7H8 128 aa6.27□□□□□ -1.41
PSEN1-208ENST00000553719 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
PSEN1-208ENST00000553719 KRTAP2-4Q9BYR9 128 aa6.27□□□□□ -1.41
PSEN1-208ENST00000553719 KTN1-AS1Q86SY8 53 aa6.24□□□□□ -1.41
PSEN1-208ENST00000553719 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
PSEN1-208ENST00000553719 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
PSEN1-208ENST00000553719 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
PSEN1-208ENST00000553719 DSTQ03001 7570 aaKnown RBP6.17□□□□□ -1.42
PSEN1-208ENST00000553719 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
PSEN1-208ENST00000553719 KRTAP2-2Q9BYT5 123 aa6.08□□□□□ -1.44
PSEN1-208ENST00000553719 KRTAP2-1Q9BYU5 128 aa6.08□□□□□ -1.44
PSEN1-208ENST00000553719 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
PSEN1-208ENST00000553719 SVIPQ8NHG7 77 aa6.03□□□□□ -1.44
PSEN1-208ENST00000553719 GPR98Q8WXG9 6306 aa5.93□□□□□ -1.46
PSEN1-208ENST00000553719 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
PSEN1-208ENST00000553719 KRTAP5-5Q701N2 237 aaPredicted RBP5.79□□□□□ -1.48
PSEN1-208ENST00000553719 KRTAP9-6A8MVA2 160 aa5.78□□□□□ -1.48
PSEN1-208ENST00000553719 H3BS24 57 aa5.78□□□□□ -1.48
PSEN1-208ENST00000553719 KRTAP5-4Q6L8H1 288 aa5.75□□□□□ -1.49
PSEN1-208ENST00000553719 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
PSEN1-208ENST00000553719 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
PSEN1-208ENST00000553719 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
PSEN1-208ENST00000553719 HMCN1Q96RW7 5635 aa5.58□□□□□ -1.52
PSEN1-208ENST00000553719 LCE1DQ5T752 114 aa5.57□□□□□ -1.52
PSEN1-208ENST00000553719 MT4P47944 62 aa5.53□□□□□ -1.52
PSEN1-208ENST00000553719 SYNE1Q8NF91 8797 aaKnown RBP5.5□□□□□ -1.53
PSEN1-208ENST00000553719 MT1AP04731 61 aa5.5□□□□□ -1.53
PSEN1-208ENST00000553719 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
PSEN1-208ENST00000553719 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
PSEN1-208ENST00000553719 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
PSEN1-208ENST00000553719 KRTAP20-2Q3LI61 65 aa5.36□□□□□ -1.55
PSEN1-208ENST00000553719 LUZP6Q538Z0 58 aa5.27□□□□□ -1.57
PSEN1-208ENST00000553719 AHNAK2Q8IVF2 5795 aa5.26□□□□□ -1.57
PSEN1-208ENST00000553719 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
PSEN1-208ENST00000553719 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
PSEN1-208ENST00000553719 KRTAP5-10Q6L8G5 202 aa5.18□□□□□ -1.58
PSEN1-208ENST00000553719 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
PSEN1-208ENST00000553719 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
PSEN1-208ENST00000553719 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
PSEN1-208ENST00000553719 MT3P25713 68 aa4.97□□□□□ -1.61
PSEN1-208ENST00000553719 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
PSEN1-208ENST00000553719 NDUFAF8A1L188 74 aa4.8□□□□□ -1.64
PSEN1-208ENST00000553719 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
PSEN1-208ENST00000553719 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
PSEN1-208ENST00000553719 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
PSEN1-208ENST00000553719 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
PSEN1-208ENST00000553719 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
PSEN1-208ENST00000553719 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
PSEN1-208ENST00000553719 MUC5ACP98088 5654 aa4.47□□□□□ -1.69
PSEN1-208ENST00000553719 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
PSEN1-208ENST00000553719 MUC5BQ9HC84 5762 aaPredicted RBP4.39□□□□□ -1.71
PSEN1-208ENST00000553719 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
PSEN1-208ENST00000553719 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
PSEN1-208ENST00000553719 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
PSEN1-208ENST00000553719 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
PSEN1-208ENST00000553719 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
PSEN1-208ENST00000553719 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
PSEN1-208ENST00000553719 INE1O15225 51 aa3.92□□□□□ -1.78
PSEN1-208ENST00000553719 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
PSEN1-208ENST00000553719 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
PSEN1-208ENST00000553719 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
PSEN1-208ENST00000553719 PRM1P04553 51 aa3.56□□□□□ -1.84
PSEN1-208ENST00000553719 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
PSEN1-208ENST00000553719 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
PSEN1-208ENST00000553719 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
PSEN1-208ENST00000553719 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
PSEN1-208ENST00000553719 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
PSEN1-208ENST00000553719 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms