RNA–Protein interactions for RNA: ENST00000553689.5

PAPOLA-205, Transcript of poly(A) polymerase alpha, humanhuman

TSL 1 (best)

Gene PAPOLA, Length 2,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-205ENST00000553689 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
PAPOLA-205ENST00000553689 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
PAPOLA-205ENST00000553689 KRTAP4-7Q9BYR0 210 aa6.45□□□□□ -1.38
PAPOLA-205ENST00000553689 MT1LQ93083 61 aa6.45□□□□□ -1.38
PAPOLA-205ENST00000553689 MT1EP04732 61 aa6.37□□□□□ -1.39
PAPOLA-205ENST00000553689 KMT2DO14686 5537 aa6.31□□□□□ -1.4
PAPOLA-205ENST00000553689 KRTAP9-7A8MTY7 169 aa6.24□□□□□ -1.41
PAPOLA-205ENST00000553689 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
PAPOLA-205ENST00000553689 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
PAPOLA-205ENST00000553689 SYNE2Q8WXH0 6885 aaKnown RBP6.09□□□□□ -1.43
PAPOLA-205ENST00000553689 KRTAP12-4P60329 112 aa6.08□□□□□ -1.44
PAPOLA-205ENST00000553689 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
PAPOLA-205ENST00000553689 MT1GP13640 62 aa5.96□□□□□ -1.46
PAPOLA-205ENST00000553689 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
PAPOLA-205ENST00000553689 MT1MQ8N339 61 aa5.91□□□□□ -1.46
PAPOLA-205ENST00000553689 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
PAPOLA-205ENST00000553689 KRTAP5-9P26371 169 aa5.9□□□□□ -1.47
PAPOLA-205ENST00000553689 KRTAP6-3Q3LI67 103 aa5.88□□□□□ -1.47
PAPOLA-205ENST00000553689 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
PAPOLA-205ENST00000553689 MUC12Q9UKN1 5478 aa5.86□□□□□ -1.47
PAPOLA-205ENST00000553689 MT1AP04731 61 aa5.77□□□□□ -1.49
PAPOLA-205ENST00000553689 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
PAPOLA-205ENST00000553689 SPRR2EP22531 72 aa5.69□□□□□ -1.5
PAPOLA-205ENST00000553689 SPRR2BP35325 72 aa5.69□□□□□ -1.5
PAPOLA-205ENST00000553689 SPRR2AP35326 72 aa5.69□□□□□ -1.5
PAPOLA-205ENST00000553689 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
PAPOLA-205ENST00000553689 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
PAPOLA-205ENST00000553689 LCE3BQ5TA77 95 aa5.6□□□□□ -1.51
PAPOLA-205ENST00000553689 NEBP20929 6669 aa5.54□□□□□ -1.52
PAPOLA-205ENST00000553689 LCE3DQ9BYE3 92 aa5.53□□□□□ -1.52
PAPOLA-205ENST00000553689 LCE3EQ5T5B0 92 aa5.52□□□□□ -1.53
PAPOLA-205ENST00000553689 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
PAPOLA-205ENST00000553689 SPRR2DP22532 72 aa5.49□□□□□ -1.53
PAPOLA-205ENST00000553689 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.53
PAPOLA-205ENST00000553689 KRTAP20-1Q3LI63 56 aa5.43□□□□□ -1.54
PAPOLA-205ENST00000553689 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
PAPOLA-205ENST00000553689 PRM1P04553 51 aa5.41□□□□□ -1.54
PAPOLA-205ENST00000553689 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
PAPOLA-205ENST00000553689 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
PAPOLA-205ENST00000553689 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
PAPOLA-205ENST00000553689 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
PAPOLA-205ENST00000553689 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
PAPOLA-205ENST00000553689 GPR98Q8WXG9 6306 aa5.02□□□□□ -1.61
PAPOLA-205ENST00000553689 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
PAPOLA-205ENST00000553689 MT3P25713 68 aa4.86□□□□□ -1.63
PAPOLA-205ENST00000553689 LCE4AQ5TA78 99 aa4.84□□□□□ -1.64
PAPOLA-205ENST00000553689 MT4P47944 62 aa4.78□□□□□ -1.64
PAPOLA-205ENST00000553689 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
PAPOLA-205ENST00000553689 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
PAPOLA-205ENST00000553689 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
PAPOLA-205ENST00000553689 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
PAPOLA-205ENST00000553689 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
PAPOLA-205ENST00000553689 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
PAPOLA-205ENST00000553689 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
PAPOLA-205ENST00000553689 LCE1EQ5T753 118 aa4.34□□□□□ -1.72
PAPOLA-205ENST00000553689 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
PAPOLA-205ENST00000553689 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
PAPOLA-205ENST00000553689 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
PAPOLA-205ENST00000553689 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
PAPOLA-205ENST00000553689 MUC5ACP98088 5654 aa4□□□□□ -1.77
PAPOLA-205ENST00000553689 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
PAPOLA-205ENST00000553689 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
PAPOLA-205ENST00000553689 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
PAPOLA-205ENST00000553689 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
PAPOLA-205ENST00000553689 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
PAPOLA-205ENST00000553689 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
PAPOLA-205ENST00000553689 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
PAPOLA-205ENST00000553689 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
PAPOLA-205ENST00000553689 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
PAPOLA-205ENST00000553689 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
PAPOLA-205ENST00000553689 KRTAP21-1Q3LI58 79 aa3.56□□□□□ -1.84
PAPOLA-205ENST00000553689 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.85
PAPOLA-205ENST00000553689 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
PAPOLA-205ENST00000553689 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
PAPOLA-205ENST00000553689 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
PAPOLA-205ENST00000553689 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
PAPOLA-205ENST00000553689 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
PAPOLA-205ENST00000553689 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 130.2 ms