RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 MT2AP02795 61 aa2.13□□□□□ -2.07
TMEM55B-204ENST00000553602 LCE3AQ5TA76 89 aa2.13□□□□□ -2.07
TMEM55B-204ENST00000553602 MT1FP04733 61 aa2.12□□□□□ -2.07
TMEM55B-204ENST00000553602 M0R2T5 61 aa2.09□□□□□ -2.07
TMEM55B-204ENST00000553602 MT1BP07438 61 aa2.09□□□□□ -2.07
TMEM55B-204ENST00000553602 KRTAP10-10P60014 251 aa2.09□□□□□ -2.07
TMEM55B-204ENST00000553602 LCE3CQ5T5A8 94 aa2.09□□□□□ -2.07
TMEM55B-204ENST00000553602 LCE1EQ5T753 118 aa2.09□□□□□ -2.07
TMEM55B-204ENST00000553602 KRTAP10-5P60370 271 aa2.08□□□□□ -2.08
TMEM55B-204ENST00000553602 MT1XP80297 61 aa2.08□□□□□ -2.08
TMEM55B-204ENST00000553602 INE1O15225 51 aa2.07□□□□□ -2.08
TMEM55B-204ENST00000553602 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
TMEM55B-204ENST00000553602 PRO2289Q9P1D8 64 aa2.05□□□□□ -2.08
TMEM55B-204ENST00000553602 FSIP2Q5CZC0 6907 aa1.95□□□□□ -2.1
TMEM55B-204ENST00000553602 CRCT1Q9UGL9 99 aa1.95□□□□□ -2.1
TMEM55B-204ENST00000553602 KRTAP19-5Q3LI72 72 aa1.92□□□□□ -2.1
TMEM55B-204ENST00000553602 LCE3EQ5T5B0 92 aa1.91□□□□□ -2.1
TMEM55B-204ENST00000553602 KRTAP2-3P0C7H8 128 aa1.87□□□□□ -2.11
TMEM55B-204ENST00000553602 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
TMEM55B-204ENST00000553602 KRTAP2-4Q9BYR9 128 aa1.87□□□□□ -2.11
TMEM55B-204ENST00000553602 KRTAP2-1Q9BYU5 128 aa1.87□□□□□ -2.11
TMEM55B-204ENST00000553602 SSPOA2VEC9 5147 aa1.87□□□□□ -2.11
TMEM55B-204ENST00000553602 USH2AO75445 5202 aa1.86□□□□□ -2.11
TMEM55B-204ENST00000553602 KRTAP19-7Q3SYF9 63 aa1.86□□□□□ -2.11
TMEM55B-204ENST00000553602 KRTAP9-6A8MVA2 160 aa1.83□□□□□ -2.12
TMEM55B-204ENST00000553602 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
TMEM55B-204ENST00000553602 MT1EP04732 61 aa1.81□□□□□ -2.12
TMEM55B-204ENST00000553602 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
TMEM55B-204ENST00000553602 MT1LQ93083 61 aa1.81□□□□□ -2.12
TMEM55B-204ENST00000553602 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
TMEM55B-204ENST00000553602 KRTAP5-9P26371 169 aa1.78□□□□□ -2.12
TMEM55B-204ENST00000553602 KRTAP19-6Q3LI70 58 aa1.78□□□□□ -2.12
TMEM55B-204ENST00000553602 MACF1Q9UPN3 7388 aaKnown RBP1.77□□□□□ -2.13
TMEM55B-204ENST00000553602 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
TMEM55B-204ENST00000553602 KRTAP6-3Q3LI67 103 aa1.71□□□□□ -2.14
TMEM55B-204ENST00000553602 MT1GP13640 62 aa1.7□□□□□ -2.14
TMEM55B-204ENST00000553602 MUC12Q9UKN1 5478 aa1.7□□□□□ -2.14
TMEM55B-204ENST00000553602 KRTAP19-3Q7Z4W3 81 aa1.69□□□□□ -2.14
TMEM55B-204ENST00000553602 MT1MQ8N339 61 aa1.68□□□□□ -2.14
TMEM55B-204ENST00000553602 OBSCNQ5VST9 7968 aa1.68□□□□□ -2.14
TMEM55B-204ENST00000553602 NEBP20929 6669 aa1.66□□□□□ -2.14
TMEM55B-204ENST00000553602 LCE3DQ9BYE3 92 aa1.63□□□□□ -2.15
TMEM55B-204ENST00000553602 KMT2DO14686 5537 aa1.61□□□□□ -2.15
TMEM55B-204ENST00000553602 MT1AP04731 61 aa1.61□□□□□ -2.15
TMEM55B-204ENST00000553602 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
TMEM55B-204ENST00000553602 KRTAP20-1Q3LI63 56 aa1.6□□□□□ -2.15
TMEM55B-204ENST00000553602 KRTAP4-3Q9BYR4 195 aa1.6□□□□□ -2.15
TMEM55B-204ENST00000553602 KRTAP12-4P60329 112 aa1.59□□□□□ -2.15
TMEM55B-204ENST00000553602 SPRR2FQ96RM1 72 aa1.57□□□□□ -2.16
TMEM55B-204ENST00000553602 SPRR2EP22531 72 aa1.56□□□□□ -2.16
TMEM55B-204ENST00000553602 SPRR2BP35325 72 aa1.56□□□□□ -2.16
TMEM55B-204ENST00000553602 SPRR2AP35326 72 aa1.56□□□□□ -2.16
TMEM55B-204ENST00000553602 KRTAP5-5Q701N2 237 aaPredicted RBP1.52□□□□□ -2.17
TMEM55B-204ENST00000553602 SPRR2DP22532 72 aa1.5□□□□□ -2.17
TMEM55B-204ENST00000553602 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
TMEM55B-204ENST00000553602 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
TMEM55B-204ENST00000553602 PRM1P04553 51 aa1.4□□□□□ -2.19
TMEM55B-204ENST00000553602 DSTQ03001 7570 aaKnown RBP1.38□□□□□ -2.19
TMEM55B-204ENST00000553602 GPR98Q8WXG9 6306 aa1.37□□□□□ -2.19
TMEM55B-204ENST00000553602 KRTAP6-2Q3LI66 62 aa1.36□□□□□ -2.19
TMEM55B-204ENST00000553602 LCE1CQ5T751 118 aa1.35□□□□□ -2.19
TMEM55B-204ENST00000553602 LCE1BQ5T7P3 118 aa1.35□□□□□ -2.19
TMEM55B-204ENST00000553602 HMCN1Q96RW7 5635 aa1.33□□□□□ -2.2
TMEM55B-204ENST00000553602 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
TMEM55B-204ENST00000553602 MT4P47944 62 aa1.29□□□□□ -2.2
TMEM55B-204ENST00000553602 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
TMEM55B-204ENST00000553602 KRTAP5-8O75690 187 aa1.25□□□□□ -2.21
TMEM55B-204ENST00000553602 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
TMEM55B-204ENST00000553602 KRTAP20-2Q3LI61 65 aa1.22□□□□□ -2.21
TMEM55B-204ENST00000553602 KRTAP5-7Q6L8G8 165 aa1.21□□□□□ -2.22
TMEM55B-204ENST00000553602 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
TMEM55B-204ENST00000553602 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
TMEM55B-204ENST00000553602 MUC5BQ9HC84 5762 aaPredicted RBP1.08□□□□□ -2.24
TMEM55B-204ENST00000553602 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
TMEM55B-204ENST00000553602 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
TMEM55B-204ENST00000553602 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
TMEM55B-204ENST00000553602 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
TMEM55B-204ENST00000553602 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 44.9 ms