RNA–Protein interactions for RNA: ENST00000553548.5

SRSF5-204, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 4 BASIC

Gene SRSF5, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-204ENST00000553548 MT1LQ93083 61 aa3.54□□□□□ -1.84
SRSF5-204ENST00000553548 SPRR2DP22532 72 aa3.52□□□□□ -1.85
SRSF5-204ENST00000553548 MT1GP13640 62 aa3.5□□□□□ -1.85
SRSF5-204ENST00000553548 PMAIP1Q13794 54 aa3.48□□□□□ -1.85
SRSF5-204ENST00000553548 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
SRSF5-204ENST00000553548 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
SRSF5-204ENST00000553548 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
SRSF5-204ENST00000553548 MT1MQ8N339 61 aa3.46□□□□□ -1.86
SRSF5-204ENST00000553548 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
SRSF5-204ENST00000553548 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
SRSF5-204ENST00000553548 KRTAP4-7Q9BYR0 210 aa3.42□□□□□ -1.86
SRSF5-204ENST00000553548 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
SRSF5-204ENST00000553548 LCE3BQ5TA77 95 aa3.41□□□□□ -1.86
SRSF5-204ENST00000553548 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
SRSF5-204ENST00000553548 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
SRSF5-204ENST00000553548 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
SRSF5-204ENST00000553548 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
SRSF5-204ENST00000553548 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.87
SRSF5-204ENST00000553548 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
SRSF5-204ENST00000553548 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
SRSF5-204ENST00000553548 LOC100996750A0A140TA64 210 aa3.22□□□□□ -1.89
SRSF5-204ENST00000553548 KTN1-AS1Q86SY8 53 aa3.22□□□□□ -1.89
SRSF5-204ENST00000553548 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
SRSF5-204ENST00000553548 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
SRSF5-204ENST00000553548 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
SRSF5-204ENST00000553548 KRTAP4-9Q9BYQ8 210 aa3.14□□□□□ -1.91
SRSF5-204ENST00000553548 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
SRSF5-204ENST00000553548 MT4P47944 62 aa3.08□□□□□ -1.92
SRSF5-204ENST00000553548 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
SRSF5-204ENST00000553548 KRTAP4-6Q9BYQ5 205 aa3.06□□□□□ -1.92
SRSF5-204ENST00000553548 SVIPQ8NHG7 77 aa3.03□□□□□ -1.92
SRSF5-204ENST00000553548 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
SRSF5-204ENST00000553548 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
SRSF5-204ENST00000553548 MT1AP04731 61 aa3□□□□□ -1.93
SRSF5-204ENST00000553548 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
SRSF5-204ENST00000553548 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.93
SRSF5-204ENST00000553548 KRTAP12-4P60329 112 aa2.96□□□□□ -1.94
SRSF5-204ENST00000553548 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
SRSF5-204ENST00000553548 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
SRSF5-204ENST00000553548 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
SRSF5-204ENST00000553548 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
SRSF5-204ENST00000553548 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
SRSF5-204ENST00000553548 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
SRSF5-204ENST00000553548 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
SRSF5-204ENST00000553548 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
SRSF5-204ENST00000553548 MT3P25713 68 aa2.72□□□□□ -1.97
SRSF5-204ENST00000553548 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
SRSF5-204ENST00000553548 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
SRSF5-204ENST00000553548 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
SRSF5-204ENST00000553548 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
SRSF5-204ENST00000553548 KRTAP5-8O75690 187 aa2.55□□□□□ -2
SRSF5-204ENST00000553548 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
SRSF5-204ENST00000553548 NDUFAF8A1L188 74 aa2.45□□□□□ -2.02
SRSF5-204ENST00000553548 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
SRSF5-204ENST00000553548 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
SRSF5-204ENST00000553548 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
SRSF5-204ENST00000553548 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
SRSF5-204ENST00000553548 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
SRSF5-204ENST00000553548 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
SRSF5-204ENST00000553548 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
SRSF5-204ENST00000553548 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
SRSF5-204ENST00000553548 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
SRSF5-204ENST00000553548 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
SRSF5-204ENST00000553548 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
SRSF5-204ENST00000553548 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
SRSF5-204ENST00000553548 A0A0A0MQY5 61 aa2.01□□□□□ -2.09
SRSF5-204ENST00000553548 KRTAP4-12Q9BQ66 201 aa2.01□□□□□ -2.09
SRSF5-204ENST00000553548 INE1O15225 51 aa1.98□□□□□ -2.09
SRSF5-204ENST00000553548 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
SRSF5-204ENST00000553548 H3BS24 57 aa1.9□□□□□ -2.11
SRSF5-204ENST00000553548 PRM1P04553 51 aa1.9□□□□□ -2.11
SRSF5-204ENST00000553548 LCE1FQ5T754 118 aa1.9□□□□□ -2.11
SRSF5-204ENST00000553548 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
SRSF5-204ENST00000553548 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
SRSF5-204ENST00000553548 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
SRSF5-204ENST00000553548 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
SRSF5-204ENST00000553548 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms